Gene : Carub.0005s1999 C. rubella v1.1
Defline:  (1 of 3) PTHR19139//PTHR19139:SF167 - AQUAPORIN TRANSPORTER // AQUAPORIN PIP2-1-RELATED Genomic Order:  1999
Name:  ? Carub.0005s1999 Secondary Identifier:  ? PAC:39226590
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1999 0.5kb upstream 0.5kb upstream 2430 true scaffold_5: 9946113-9948542 Capsella rubella
Carub.0005s1999 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9948043-9948542 Capsella rubella
Carub.0005s1999 0.5kb downstream 0.5kb downstream 2430 true scaffold_5: 9945613-9948042 Capsella rubella
Carub.0005s1999 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9945613-9946112 Capsella rubella
Carub.0005s1999 1.0kb upstream 1.0kb upstream 2930 true scaffold_5: 9946113-9949042 Capsella rubella
Carub.0005s1999 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9948043-9949042 Capsella rubella
Carub.0005s1999 1.0kb downstream 1.0kb downstream 2930 true scaffold_5: 9945113-9948042 Capsella rubella
Carub.0005s1999 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9945113-9946112 Capsella rubella
Carub.0005s1999 2.0kb upstream 2.0kb upstream 3930 true scaffold_5: 9946113-9950042 Capsella rubella
Carub.0005s1999 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9948043-9950042 Capsella rubella
Carub.0005s1999 2.0kb downstream 2.0kb downstream 3930 true scaffold_5: 9944113-9948042 Capsella rubella
Carub.0005s1999 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9944113-9946112 Capsella rubella
Carub.0005s1999 5.0kb upstream 5.0kb upstream 6930 true scaffold_5: 9946113-9953042 Capsella rubella
Carub.0005s1999 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9948043-9953042 Capsella rubella
Carub.0005s1999 5.0kb downstream 5.0kb downstream 6930 true scaffold_5: 9941113-9948042 Capsella rubella
Carub.0005s1999 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9941113-9946112 Capsella rubella
Carub.0005s1999 10.0kb upstream 10.0kb upstream 11930 true scaffold_5: 9946113-9958042 Capsella rubella
Carub.0005s1999 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9948043-9958042 Capsella rubella
Carub.0005s1999 10.0kb downstream 10.0kb downstream 11930 true scaffold_5: 9936113-9948042 Capsella rubella
Carub.0005s1999 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9936113-9946112 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366398 5261 Brassicaceae View MSA
123841120 5264 Brassicales-Malvales View MSA
124348415 5266 SBM View MSA
124250683 5268 Malvidae View MSA
124072512 5270 Rosid View MSA
123751650 5271 Pentapetalae View MSA
122791496 5272 Eudicot View MSA
122046313 5273 Angiosperm View MSA
121349621 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain