Gene : Carub.0005s2028 C. rubella v1.1
Defline:  (1 of 7) PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  2028
Name:  ? Carub.0005s2028 Secondary Identifier:  ? PAC:39223773
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2028 0.5kb upstream 0.5kb upstream 2797 true scaffold_5: 10057110-10059906 Capsella rubella
Carub.0005s2028 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10057110-10057609 Capsella rubella
Carub.0005s2028 0.5kb downstream 0.5kb downstream 2797 true scaffold_5: 10057610-10060406 Capsella rubella
Carub.0005s2028 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10059907-10060406 Capsella rubella
Carub.0005s2028 1.0kb upstream 1.0kb upstream 3297 true scaffold_5: 10056610-10059906 Capsella rubella
Carub.0005s2028 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10056610-10057609 Capsella rubella
Carub.0005s2028 1.0kb downstream 1.0kb downstream 3297 true scaffold_5: 10057610-10060906 Capsella rubella
Carub.0005s2028 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10059907-10060906 Capsella rubella
Carub.0005s2028 2.0kb upstream 2.0kb upstream 4297 true scaffold_5: 10055610-10059906 Capsella rubella
Carub.0005s2028 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10055610-10057609 Capsella rubella
Carub.0005s2028 2.0kb downstream 2.0kb downstream 4297 true scaffold_5: 10057610-10061906 Capsella rubella
Carub.0005s2028 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10059907-10061906 Capsella rubella
Carub.0005s2028 5.0kb upstream 5.0kb upstream 7297 true scaffold_5: 10052610-10059906 Capsella rubella
Carub.0005s2028 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10052610-10057609 Capsella rubella
Carub.0005s2028 5.0kb downstream 5.0kb downstream 7297 true scaffold_5: 10057610-10064906 Capsella rubella
Carub.0005s2028 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10059907-10064906 Capsella rubella
Carub.0005s2028 10.0kb upstream 10.0kb upstream 12297 true scaffold_5: 10047610-10059906 Capsella rubella
Carub.0005s2028 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10047610-10057609 Capsella rubella
Carub.0005s2028 10.0kb downstream 10.0kb downstream 12297 true scaffold_5: 10057610-10069906 Capsella rubella
Carub.0005s2028 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10059907-10069906 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370118 5261 Brassicaceae View MSA
123830394 5264 Brassicales-Malvales View MSA
124343968 5266 SBM View MSA
124241547 5268 Malvidae View MSA
124068324 5270 Rosid View MSA
123737648 5271 Pentapetalae View MSA
122793672 5272 Eudicot View MSA
122045784 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain