Gene : Carub.0005s2026 C. rubella v1.1
Defline:  (1 of 2) PTHR24098//PTHR24098:SF12 - FAMILY NOT NAMED // ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN Genomic Order:  2026
Name:  ? Carub.0005s2026 Secondary Identifier:  ? PAC:39225901
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2026 0.5kb upstream 0.5kb upstream 5772 true scaffold_5: 10050144-10055915 Capsella rubella
Carub.0005s2026 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10055416-10055915 Capsella rubella
Carub.0005s2026 0.5kb downstream 0.5kb downstream 5772 true scaffold_5: 10049644-10055415 Capsella rubella
Carub.0005s2026 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10049644-10050143 Capsella rubella
Carub.0005s2026 1.0kb upstream 1.0kb upstream 6272 true scaffold_5: 10050144-10056415 Capsella rubella
Carub.0005s2026 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10055416-10056415 Capsella rubella
Carub.0005s2026 1.0kb downstream 1.0kb downstream 6272 true scaffold_5: 10049144-10055415 Capsella rubella
Carub.0005s2026 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10049144-10050143 Capsella rubella
Carub.0005s2026 2.0kb upstream 2.0kb upstream 7272 true scaffold_5: 10050144-10057415 Capsella rubella
Carub.0005s2026 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10055416-10057415 Capsella rubella
Carub.0005s2026 2.0kb downstream 2.0kb downstream 7272 true scaffold_5: 10048144-10055415 Capsella rubella
Carub.0005s2026 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10048144-10050143 Capsella rubella
Carub.0005s2026 5.0kb upstream 5.0kb upstream 10272 true scaffold_5: 10050144-10060415 Capsella rubella
Carub.0005s2026 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10055416-10060415 Capsella rubella
Carub.0005s2026 5.0kb downstream 5.0kb downstream 10272 true scaffold_5: 10045144-10055415 Capsella rubella
Carub.0005s2026 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10045144-10050143 Capsella rubella
Carub.0005s2026 10.0kb upstream 10.0kb upstream 15272 true scaffold_5: 10050144-10065415 Capsella rubella
Carub.0005s2026 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10055416-10065415 Capsella rubella
Carub.0005s2026 10.0kb downstream 10.0kb downstream 15272 true scaffold_5: 10040144-10055415 Capsella rubella
Carub.0005s2026 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10040144-10050143 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377305 5261 Brassicaceae View MSA
123801497 5264 Brassicales-Malvales View MSA
124298794 5266 SBM View MSA
124243929 5268 Malvidae View MSA
124067394 5270 Rosid View MSA
123737655 5271 Pentapetalae View MSA
122795186 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain