Gene : Carub.0005s1820 C. rubella v1.1
Defline:  (1 of 1) PTHR24349//PTHR24349:SF145 - SERINE/THREONINE-PROTEIN KINASE // SUBFAMILY NOT NAMED Genomic Order:  1820
Name:  ? Carub.0005s1820 Secondary Identifier:  ? PAC:39223754
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1820 0.5kb upstream 0.5kb upstream 4046 true scaffold_5: 9323393-9327438 Capsella rubella
Carub.0005s1820 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9323393-9323892 Capsella rubella
Carub.0005s1820 0.5kb downstream 0.5kb downstream 4046 true scaffold_5: 9323893-9327938 Capsella rubella
Carub.0005s1820 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9327439-9327938 Capsella rubella
Carub.0005s1820 1.0kb upstream 1.0kb upstream 4546 true scaffold_5: 9322893-9327438 Capsella rubella
Carub.0005s1820 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9322893-9323892 Capsella rubella
Carub.0005s1820 1.0kb downstream 1.0kb downstream 4546 true scaffold_5: 9323893-9328438 Capsella rubella
Carub.0005s1820 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9327439-9328438 Capsella rubella
Carub.0005s1820 2.0kb upstream 2.0kb upstream 5546 true scaffold_5: 9321893-9327438 Capsella rubella
Carub.0005s1820 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9321893-9323892 Capsella rubella
Carub.0005s1820 2.0kb downstream 2.0kb downstream 5546 true scaffold_5: 9323893-9329438 Capsella rubella
Carub.0005s1820 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9327439-9329438 Capsella rubella
Carub.0005s1820 5.0kb upstream 5.0kb upstream 8546 true scaffold_5: 9318893-9327438 Capsella rubella
Carub.0005s1820 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9318893-9323892 Capsella rubella
Carub.0005s1820 5.0kb downstream 5.0kb downstream 8546 true scaffold_5: 9323893-9332438 Capsella rubella
Carub.0005s1820 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9327439-9332438 Capsella rubella
Carub.0005s1820 10.0kb upstream 10.0kb upstream 13546 true scaffold_5: 9313893-9327438 Capsella rubella
Carub.0005s1820 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9313893-9323892 Capsella rubella
Carub.0005s1820 10.0kb downstream 10.0kb downstream 13546 true scaffold_5: 9323893-9337438 Capsella rubella
Carub.0005s1820 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9327439-9337438 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374868 5261 Brassicaceae View MSA
123840160 5264 Brassicales-Malvales View MSA
124344631 5266 SBM View MSA
124241627 5268 Malvidae View MSA
124062944 5270 Rosid View MSA
123751809 5271 Pentapetalae View MSA
122786253 5272 Eudicot View MSA
122050493 5273 Angiosperm View MSA
121348324 5274 Embryophyte View MSA
123380819 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain