Gene : Carub.0005s1819 C. rubella v1.1
Defline:  (1 of 1) PTHR10909//PTHR10909:SF331 - ELECTRON TRANSPORT OXIDOREDUCTASE // ACYL-COENZYME A OXIDASE 4, PEROXISOMAL Genomic Order:  1819
Name:  ? Carub.0005s1819 Secondary Identifier:  ? PAC:39226052
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5136 Capsella rubella pathologic  
Crubella PWY-561 Capsella rubella pathologic  
Crubella PWY-6837 Capsella rubella pathologic  
Crubella PWY-735 Capsella rubella pathologic  
Crubella PWY-7606 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1819 0.5kb upstream 0.5kb upstream 3931 true scaffold_5: 9315380-9319310 Capsella rubella
Carub.0005s1819 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9318811-9319310 Capsella rubella
Carub.0005s1819 0.5kb downstream 0.5kb downstream 3931 true scaffold_5: 9314880-9318810 Capsella rubella
Carub.0005s1819 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9314880-9315379 Capsella rubella
Carub.0005s1819 1.0kb upstream 1.0kb upstream 4431 true scaffold_5: 9315380-9319810 Capsella rubella
Carub.0005s1819 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9318811-9319810 Capsella rubella
Carub.0005s1819 1.0kb downstream 1.0kb downstream 4431 true scaffold_5: 9314380-9318810 Capsella rubella
Carub.0005s1819 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9314380-9315379 Capsella rubella
Carub.0005s1819 2.0kb upstream 2.0kb upstream 5431 true scaffold_5: 9315380-9320810 Capsella rubella
Carub.0005s1819 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9318811-9320810 Capsella rubella
Carub.0005s1819 2.0kb downstream 2.0kb downstream 5431 true scaffold_5: 9313380-9318810 Capsella rubella
Carub.0005s1819 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9313380-9315379 Capsella rubella
Carub.0005s1819 5.0kb upstream 5.0kb upstream 8431 true scaffold_5: 9315380-9323810 Capsella rubella
Carub.0005s1819 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9318811-9323810 Capsella rubella
Carub.0005s1819 5.0kb downstream 5.0kb downstream 8431 true scaffold_5: 9310380-9318810 Capsella rubella
Carub.0005s1819 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9310380-9315379 Capsella rubella
Carub.0005s1819 10.0kb upstream 10.0kb upstream 13431 true scaffold_5: 9315380-9328810 Capsella rubella
Carub.0005s1819 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9318811-9328810 Capsella rubella
Carub.0005s1819 10.0kb downstream 10.0kb downstream 13431 true scaffold_5: 9305380-9318810 Capsella rubella
Carub.0005s1819 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9305380-9315379 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373643 5261 Brassicaceae View MSA
123833749 5264 Brassicales-Malvales View MSA
124350232 5266 SBM View MSA
124245049 5268 Malvidae View MSA
124065996 5270 Rosid View MSA
123739939 5271 Pentapetalae View MSA
122789024 5272 Eudicot View MSA
122043325 5273 Angiosperm View MSA
121347950 5274 Embryophyte View MSA
123424845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain