Gene : Carub.0005s1833 C. rubella v1.1

Defline:  (1 of 1) K14001 - nucleotide exchange factor SIL1 (SIL1, SLS1) Genomic Order:  1833
Name:  ? Carub.0005s1833 Secondary Identifier:  ? PAC:39224573

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1833 0.5kb upstream 0.5kb upstream 3147 true scaffold_5: 9378661-9381807 Capsella rubella
Carub.0005s1833 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9381308-9381807 Capsella rubella
Carub.0005s1833 0.5kb downstream 0.5kb downstream 3147 true scaffold_5: 9378161-9381307 Capsella rubella
Carub.0005s1833 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9378161-9378660 Capsella rubella
Carub.0005s1833 1.0kb upstream 1.0kb upstream 3647 true scaffold_5: 9378661-9382307 Capsella rubella
Carub.0005s1833 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9381308-9382307 Capsella rubella
Carub.0005s1833 1.0kb downstream 1.0kb downstream 3647 true scaffold_5: 9377661-9381307 Capsella rubella
Carub.0005s1833 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9377661-9378660 Capsella rubella
Carub.0005s1833 2.0kb upstream 2.0kb upstream 4647 true scaffold_5: 9378661-9383307 Capsella rubella
Carub.0005s1833 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9381308-9383307 Capsella rubella
Carub.0005s1833 2.0kb downstream 2.0kb downstream 4647 true scaffold_5: 9376661-9381307 Capsella rubella
Carub.0005s1833 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9376661-9378660 Capsella rubella
Carub.0005s1833 5.0kb upstream 5.0kb upstream 7647 true scaffold_5: 9378661-9386307 Capsella rubella
Carub.0005s1833 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9381308-9386307 Capsella rubella
Carub.0005s1833 5.0kb downstream 5.0kb downstream 7647 true scaffold_5: 9373661-9381307 Capsella rubella
Carub.0005s1833 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9373661-9378660 Capsella rubella
Carub.0005s1833 10.0kb upstream 10.0kb upstream 12647 true scaffold_5: 9378661-9391307 Capsella rubella
Carub.0005s1833 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9381308-9391307 Capsella rubella
Carub.0005s1833 10.0kb downstream 10.0kb downstream 12647 true scaffold_5: 9368661-9381307 Capsella rubella
Carub.0005s1833 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9368661-9378660 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361004 5261 Brassicaceae View MSA
123833581 5264 Brassicales-Malvales View MSA
124339353 5266 SBM View MSA
124238573 5268 Malvidae View MSA
124065621 5270 Rosid View MSA
123748687 5271 Pentapetalae View MSA
122785799 5272 Eudicot View MSA
122044070 5273 Angiosperm View MSA
121347280 5274 Embryophyte View MSA
123426029 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain