Gene : Carub.0005s1831 C. rubella v1.1
Defline:  (1 of 3) PTHR23334//PTHR23334:SF25 - CCAAT/ENHANCER BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1831
Name:  ? Carub.0005s1831 Secondary Identifier:  ? PAC:39226771
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1831 0.5kb upstream 0.5kb upstream 1474 true scaffold_5: 9376438-9377911 Capsella rubella
Carub.0005s1831 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9377412-9377911 Capsella rubella
Carub.0005s1831 0.5kb downstream 0.5kb downstream 1474 true scaffold_5: 9375938-9377411 Capsella rubella
Carub.0005s1831 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9375938-9376437 Capsella rubella
Carub.0005s1831 1.0kb upstream 1.0kb upstream 1974 true scaffold_5: 9376438-9378411 Capsella rubella
Carub.0005s1831 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9377412-9378411 Capsella rubella
Carub.0005s1831 1.0kb downstream 1.0kb downstream 1974 true scaffold_5: 9375438-9377411 Capsella rubella
Carub.0005s1831 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9375438-9376437 Capsella rubella
Carub.0005s1831 2.0kb upstream 2.0kb upstream 2974 true scaffold_5: 9376438-9379411 Capsella rubella
Carub.0005s1831 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9377412-9379411 Capsella rubella
Carub.0005s1831 2.0kb downstream 2.0kb downstream 2974 true scaffold_5: 9374438-9377411 Capsella rubella
Carub.0005s1831 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9374438-9376437 Capsella rubella
Carub.0005s1831 5.0kb upstream 5.0kb upstream 5974 true scaffold_5: 9376438-9382411 Capsella rubella
Carub.0005s1831 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9377412-9382411 Capsella rubella
Carub.0005s1831 5.0kb downstream 5.0kb downstream 5974 true scaffold_5: 9371438-9377411 Capsella rubella
Carub.0005s1831 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9371438-9376437 Capsella rubella
Carub.0005s1831 10.0kb upstream 10.0kb upstream 10974 true scaffold_5: 9376438-9387411 Capsella rubella
Carub.0005s1831 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9377412-9387411 Capsella rubella
Carub.0005s1831 10.0kb downstream 10.0kb downstream 10974 true scaffold_5: 9366438-9377411 Capsella rubella
Carub.0005s1831 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9366438-9376437 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367448 5261 Brassicaceae View MSA
123799354 5264 Brassicales-Malvales View MSA
124296881 5266 SBM View MSA
124148914 5268 Malvidae View MSA
124070072 5270 Rosid View MSA
123749570 5271 Pentapetalae View MSA
122773209 5272 Eudicot View MSA
122050154 5273 Angiosperm View MSA
121349674 5274 Embryophyte View MSA
123381395 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain