Gene : Carub.0005s1852 C. rubella v1.1
Defline:  (1 of 1) PTHR31561//PTHR31561:SF21 - FAMILY NOT NAMED // 3-KETOACYL-COA SYNTHASE 15 Genomic Order:  1852
Name:  ? Carub.0005s1852 Secondary Identifier:  ? PAC:39225609
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5080 Capsella rubella pathologic  
Crubella PWY-6433 Capsella rubella pathologic  
Crubella PWY-6598 Capsella rubella pathologic  
Crubella PWY-7036 Capsella rubella pathologic  
Crubella PWY-7601 Capsella rubella pathologic  
Crubella PWY-7619 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1852 0.5kb upstream 0.5kb upstream 2038 true scaffold_5: 9429953-9431990 Capsella rubella
Carub.0005s1852 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9431491-9431990 Capsella rubella
Carub.0005s1852 0.5kb downstream 0.5kb downstream 2038 true scaffold_5: 9429453-9431490 Capsella rubella
Carub.0005s1852 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9429453-9429952 Capsella rubella
Carub.0005s1852 1.0kb upstream 1.0kb upstream 2538 true scaffold_5: 9429953-9432490 Capsella rubella
Carub.0005s1852 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9431491-9432490 Capsella rubella
Carub.0005s1852 1.0kb downstream 1.0kb downstream 2538 true scaffold_5: 9428953-9431490 Capsella rubella
Carub.0005s1852 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9428953-9429952 Capsella rubella
Carub.0005s1852 2.0kb upstream 2.0kb upstream 3538 true scaffold_5: 9429953-9433490 Capsella rubella
Carub.0005s1852 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9431491-9433490 Capsella rubella
Carub.0005s1852 2.0kb downstream 2.0kb downstream 3538 true scaffold_5: 9427953-9431490 Capsella rubella
Carub.0005s1852 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9427953-9429952 Capsella rubella
Carub.0005s1852 5.0kb upstream 5.0kb upstream 6538 true scaffold_5: 9429953-9436490 Capsella rubella
Carub.0005s1852 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9431491-9436490 Capsella rubella
Carub.0005s1852 5.0kb downstream 5.0kb downstream 6538 true scaffold_5: 9424953-9431490 Capsella rubella
Carub.0005s1852 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9424953-9429952 Capsella rubella
Carub.0005s1852 10.0kb upstream 10.0kb upstream 11538 true scaffold_5: 9429953-9441490 Capsella rubella
Carub.0005s1852 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9431491-9441490 Capsella rubella
Carub.0005s1852 10.0kb downstream 10.0kb downstream 11538 true scaffold_5: 9419953-9431490 Capsella rubella
Carub.0005s1852 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9419953-9429952 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791805 5273 Angiosperm View MSA
122361755 5261 Brassicaceae View MSA
123798240 5264 Brassicales-Malvales View MSA
124295908 5266 SBM View MSA
124148215 5268 Malvidae View MSA
124070288 5270 Rosid View MSA
123742604 5271 Pentapetalae View MSA
122793984 5272 Eudicot View MSA
121063095 5274 Embryophyte View MSA
123102879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain