Protein : Carub.0005s1848.1.p C. rubella v1.1

Secondary Identifier:  PAC:39223842 Organism Name:  Capsella rubella
Length:  1396   Name:  Carub.0005s1848.1.p
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Proteins

9 Protein Domains

DB identifier Type Name
IPR011990 Domain Tetratricopeptide-like helical domain
IPR013026 Domain Tetratricopeptide repeat-containing domain
IPR015422 Domain Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR019734 Repeat Tetratricopeptide repeat
IPR003822 Repeat Paired amphipathic helix
IPR028275 Domain Clustered mitochondria protein, N-terminal
IPR025697 Domain CLU domain
IPR023231 Domain GSKIP domain
IPR007967 Family Protein of unknown function DUF727
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Carub.0005s1848.1_CDS 4191   scaffold_5: 9415990-9423850 Capsella rubella

28 Ontology Annotations

Ontology Term Db Gene/Protein Name
K03255 KEGG Carub.0005s1848.1.p
PTHR12601 PANTHER Carub.0005s1848.1.p
IPR025697 InterPro Carub.0005s1848.1.p
IPR028275 InterPro Carub.0005s1848.1.p
PF12807 PFAM Carub.0005s1848.1.p
PF13236 PFAM Carub.0005s1848.1.p
PTHR12601:SF6 PANTHER Carub.0005s1848.1.p
PF05303 PFAM Carub.0005s1848.1.p
IPR011990 InterPro Carub.0005s1848.1.p
IPR013026 InterPro Carub.0005s1848.1.p
IPR007967 InterPro Carub.0005s1848.1.p
IPR023231 InterPro Carub.0005s1848.1.p
IPR015422 InterPro Carub.0005s1848.1.p
IPR019734 InterPro Carub.0005s1848.1.p
PS50005 PROFILE Carub.0005s1848.1.p
PS50293 PROFILE Carub.0005s1848.1.p
PF13424 PFAM Carub.0005s1848.1.p
PF15044 PFAM Carub.0005s1848.1.p
SSF48452 SSF Carub.0005s1848.1.p
SM00028 SMART Carub.0005s1848.1.p
SSF103107 SSF Carub.0005s1848.1.p
G3DSA:1.25.40.10 GENE3D Carub.0005s1848.1.p
G3DSA:3.90.1150.10 GENE3D Carub.0005s1848.1.p
G3DSA:1.20.1160.11 GENE3D Carub.0005s1848.1.p
GO:0006355 GO Carub.0005s1848.1.p
IPR003822 InterPro Carub.0005s1848.1.p
GO:0003824 GO Carub.0005s1848.1.p
GO:0005515 GO Carub.0005s1848.1.p

0 Pathway Components

0 Pathways