Gene : Carub.0005s1875 C. rubella v1.1
Defline:  (1 of 1) PTHR10060//PTHR10060:SF15 - TATD FAMILY DEOXYRIBONUCLEASE // DEOXYRIBONUCLEASE TATDN1-RELATED Genomic Order:  1875
Name:  ? Carub.0005s1875 Secondary Identifier:  ? PAC:39225157
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1875 0.5kb upstream 0.5kb upstream 3065 true scaffold_5: 9511751-9514815 Capsella rubella
Carub.0005s1875 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9514316-9514815 Capsella rubella
Carub.0005s1875 0.5kb downstream 0.5kb downstream 3065 true scaffold_5: 9511251-9514315 Capsella rubella
Carub.0005s1875 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9511251-9511750 Capsella rubella
Carub.0005s1875 1.0kb upstream 1.0kb upstream 3565 true scaffold_5: 9511751-9515315 Capsella rubella
Carub.0005s1875 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9514316-9515315 Capsella rubella
Carub.0005s1875 1.0kb downstream 1.0kb downstream 3565 true scaffold_5: 9510751-9514315 Capsella rubella
Carub.0005s1875 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9510751-9511750 Capsella rubella
Carub.0005s1875 2.0kb upstream 2.0kb upstream 4565 true scaffold_5: 9511751-9516315 Capsella rubella
Carub.0005s1875 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9514316-9516315 Capsella rubella
Carub.0005s1875 2.0kb downstream 2.0kb downstream 4565 true scaffold_5: 9509751-9514315 Capsella rubella
Carub.0005s1875 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9509751-9511750 Capsella rubella
Carub.0005s1875 5.0kb upstream 5.0kb upstream 7565 true scaffold_5: 9511751-9519315 Capsella rubella
Carub.0005s1875 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9514316-9519315 Capsella rubella
Carub.0005s1875 5.0kb downstream 5.0kb downstream 7565 true scaffold_5: 9506751-9514315 Capsella rubella
Carub.0005s1875 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9506751-9511750 Capsella rubella
Carub.0005s1875 10.0kb upstream 10.0kb upstream 12565 true scaffold_5: 9511751-9524315 Capsella rubella
Carub.0005s1875 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9514316-9524315 Capsella rubella
Carub.0005s1875 10.0kb downstream 10.0kb downstream 12565 true scaffold_5: 9501751-9514315 Capsella rubella
Carub.0005s1875 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9501751-9511750 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364837 5261 Brassicaceae View MSA
123834743 5264 Brassicales-Malvales View MSA
124342043 5266 SBM View MSA
124238053 5268 Malvidae View MSA
124066982 5270 Rosid View MSA
123737057 5271 Pentapetalae View MSA
122786612 5272 Eudicot View MSA
122047373 5273 Angiosperm View MSA
121345564 5274 Embryophyte View MSA
123428718 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain