Gene : Carub.0005s1868 C. rubella v1.1
Defline:  (1 of 4) 3.1.3.24 - Sucrose-phosphate phosphatase / Sucrose-6-phosphate phosphatase Genomic Order:  1868
Name:  ? Carub.0005s1868 Secondary Identifier:  ? PAC:39225253
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7238 Capsella rubella pathologic  
Crubella SUCSYN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1868 0.5kb upstream 0.5kb upstream 3262 true scaffold_5: 9489240-9492501 Capsella rubella
Carub.0005s1868 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9489240-9489739 Capsella rubella
Carub.0005s1868 0.5kb downstream 0.5kb downstream 3262 true scaffold_5: 9489740-9493001 Capsella rubella
Carub.0005s1868 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9492502-9493001 Capsella rubella
Carub.0005s1868 1.0kb upstream 1.0kb upstream 3762 true scaffold_5: 9488740-9492501 Capsella rubella
Carub.0005s1868 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9488740-9489739 Capsella rubella
Carub.0005s1868 1.0kb downstream 1.0kb downstream 3762 true scaffold_5: 9489740-9493501 Capsella rubella
Carub.0005s1868 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9492502-9493501 Capsella rubella
Carub.0005s1868 2.0kb upstream 2.0kb upstream 4762 true scaffold_5: 9487740-9492501 Capsella rubella
Carub.0005s1868 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9487740-9489739 Capsella rubella
Carub.0005s1868 2.0kb downstream 2.0kb downstream 4762 true scaffold_5: 9489740-9494501 Capsella rubella
Carub.0005s1868 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9492502-9494501 Capsella rubella
Carub.0005s1868 5.0kb upstream 5.0kb upstream 7762 true scaffold_5: 9484740-9492501 Capsella rubella
Carub.0005s1868 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9484740-9489739 Capsella rubella
Carub.0005s1868 5.0kb downstream 5.0kb downstream 7762 true scaffold_5: 9489740-9497501 Capsella rubella
Carub.0005s1868 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9492502-9497501 Capsella rubella
Carub.0005s1868 10.0kb upstream 10.0kb upstream 12762 true scaffold_5: 9479740-9492501 Capsella rubella
Carub.0005s1868 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9479740-9489739 Capsella rubella
Carub.0005s1868 10.0kb downstream 10.0kb downstream 12762 true scaffold_5: 9489740-9502501 Capsella rubella
Carub.0005s1868 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9492502-9502501 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511326 5273 Angiosperm View MSA
122375253 5261 Brassicaceae View MSA
123800913 5264 Brassicales-Malvales View MSA
124298272 5266 SBM View MSA
124149954 5268 Malvidae View MSA
123875662 5270 Rosid View MSA
123459448 5271 Pentapetalae View MSA
122494839 5272 Eudicot View MSA
123428930 5275 Viridiplantae View MSA
120784376 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain