Gene : Carub.0005s1888 C. rubella v1.1
Defline:  (1 of 2) PTHR11638//PTHR11638:SF69 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Genomic Order:  1888
Name:  ? Carub.0005s1888 Secondary Identifier:  ? PAC:39225325
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1888 0.5kb upstream 0.5kb upstream 3889 true scaffold_5: 9563173-9567061 Capsella rubella
Carub.0005s1888 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9566562-9567061 Capsella rubella
Carub.0005s1888 0.5kb downstream 0.5kb downstream 3889 true scaffold_5: 9562673-9566561 Capsella rubella
Carub.0005s1888 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9562673-9563172 Capsella rubella
Carub.0005s1888 1.0kb upstream 1.0kb upstream 4389 true scaffold_5: 9563173-9567561 Capsella rubella
Carub.0005s1888 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9566562-9567561 Capsella rubella
Carub.0005s1888 1.0kb downstream 1.0kb downstream 4389 true scaffold_5: 9562173-9566561 Capsella rubella
Carub.0005s1888 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9562173-9563172 Capsella rubella
Carub.0005s1888 2.0kb upstream 2.0kb upstream 5389 true scaffold_5: 9563173-9568561 Capsella rubella
Carub.0005s1888 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9566562-9568561 Capsella rubella
Carub.0005s1888 2.0kb downstream 2.0kb downstream 5389 true scaffold_5: 9561173-9566561 Capsella rubella
Carub.0005s1888 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9561173-9563172 Capsella rubella
Carub.0005s1888 5.0kb upstream 5.0kb upstream 8389 true scaffold_5: 9563173-9571561 Capsella rubella
Carub.0005s1888 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9566562-9571561 Capsella rubella
Carub.0005s1888 5.0kb downstream 5.0kb downstream 8389 true scaffold_5: 9558173-9566561 Capsella rubella
Carub.0005s1888 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9558173-9563172 Capsella rubella
Carub.0005s1888 10.0kb upstream 10.0kb upstream 13389 true scaffold_5: 9563173-9576561 Capsella rubella
Carub.0005s1888 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9566562-9576561 Capsella rubella
Carub.0005s1888 10.0kb downstream 10.0kb downstream 13389 true scaffold_5: 9553173-9566561 Capsella rubella
Carub.0005s1888 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9553173-9563172 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367447 5261 Brassicaceae View MSA
123833946 5264 Brassicales-Malvales View MSA
124337005 5266 SBM View MSA
124244342 5268 Malvidae View MSA
124070007 5270 Rosid View MSA
123743418 5271 Pentapetalae View MSA
122787302 5272 Eudicot View MSA
122049419 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain