Gene : Carub.0005s1909 C. rubella v1.1
Defline:  (1 of 79) PTHR32212//PTHR32212:SF126 - FAMILY NOT NAMED // EMB|CAB62440.1-RELATED Genomic Order:  1909
Name:  ? Carub.0005s1909 Secondary Identifier:  ? PAC:39225558
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1909 0.5kb upstream 0.5kb upstream 2339 true scaffold_5: 9648208-9650546 Capsella rubella
Carub.0005s1909 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 9648208-9648707 Capsella rubella
Carub.0005s1909 0.5kb downstream 0.5kb downstream 2339 true scaffold_5: 9648708-9651046 Capsella rubella
Carub.0005s1909 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 9650547-9651046 Capsella rubella
Carub.0005s1909 1.0kb upstream 1.0kb upstream 2839 true scaffold_5: 9647708-9650546 Capsella rubella
Carub.0005s1909 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 9647708-9648707 Capsella rubella
Carub.0005s1909 1.0kb downstream 1.0kb downstream 2839 true scaffold_5: 9648708-9651546 Capsella rubella
Carub.0005s1909 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 9650547-9651546 Capsella rubella
Carub.0005s1909 2.0kb upstream 2.0kb upstream 3839 true scaffold_5: 9646708-9650546 Capsella rubella
Carub.0005s1909 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 9646708-9648707 Capsella rubella
Carub.0005s1909 2.0kb downstream 2.0kb downstream 3839 true scaffold_5: 9648708-9652546 Capsella rubella
Carub.0005s1909 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 9650547-9652546 Capsella rubella
Carub.0005s1909 5.0kb upstream 5.0kb upstream 6839 true scaffold_5: 9643708-9650546 Capsella rubella
Carub.0005s1909 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 9643708-9648707 Capsella rubella
Carub.0005s1909 5.0kb downstream 5.0kb downstream 6839 true scaffold_5: 9648708-9655546 Capsella rubella
Carub.0005s1909 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 9650547-9655546 Capsella rubella
Carub.0005s1909 10.0kb upstream 10.0kb upstream 11839 true scaffold_5: 9638708-9650546 Capsella rubella
Carub.0005s1909 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 9638708-9648707 Capsella rubella
Carub.0005s1909 10.0kb downstream 10.0kb downstream 11839 true scaffold_5: 9648708-9660546 Capsella rubella
Carub.0005s1909 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 9650547-9660546 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378245 5261 Brassicaceae View MSA
123801800 5264 Brassicales-Malvales View MSA
124299060 5266 SBM View MSA
124150566 5268 Malvidae View MSA
124073024 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain