Gene : Carub.0005s2073 C. rubella v1.1
Defline:  (1 of 2) PTHR11654//PTHR11654:SF125 - OLIGOPEPTIDE TRANSPORTER-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2073
Name:  ? Carub.0005s2073 Secondary Identifier:  ? PAC:39225546
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2073 0.5kb upstream 0.5kb upstream 3645 true scaffold_5: 10218523-10222167 Capsella rubella
Carub.0005s2073 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10221668-10222167 Capsella rubella
Carub.0005s2073 0.5kb downstream 0.5kb downstream 3645 true scaffold_5: 10218023-10221667 Capsella rubella
Carub.0005s2073 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10218023-10218522 Capsella rubella
Carub.0005s2073 1.0kb upstream 1.0kb upstream 4145 true scaffold_5: 10218523-10222667 Capsella rubella
Carub.0005s2073 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10221668-10222667 Capsella rubella
Carub.0005s2073 1.0kb downstream 1.0kb downstream 4145 true scaffold_5: 10217523-10221667 Capsella rubella
Carub.0005s2073 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10217523-10218522 Capsella rubella
Carub.0005s2073 2.0kb upstream 2.0kb upstream 5145 true scaffold_5: 10218523-10223667 Capsella rubella
Carub.0005s2073 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10221668-10223667 Capsella rubella
Carub.0005s2073 2.0kb downstream 2.0kb downstream 5145 true scaffold_5: 10216523-10221667 Capsella rubella
Carub.0005s2073 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10216523-10218522 Capsella rubella
Carub.0005s2073 5.0kb upstream 5.0kb upstream 8145 true scaffold_5: 10218523-10226667 Capsella rubella
Carub.0005s2073 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10221668-10226667 Capsella rubella
Carub.0005s2073 5.0kb downstream 5.0kb downstream 8145 true scaffold_5: 10213523-10221667 Capsella rubella
Carub.0005s2073 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10213523-10218522 Capsella rubella
Carub.0005s2073 10.0kb upstream 10.0kb upstream 13145 true scaffold_5: 10218523-10231667 Capsella rubella
Carub.0005s2073 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10221668-10231667 Capsella rubella
Carub.0005s2073 10.0kb downstream 10.0kb downstream 13145 true scaffold_5: 10208523-10221667 Capsella rubella
Carub.0005s2073 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10208523-10218522 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362911 5261 Brassicaceae View MSA
123836861 5264 Brassicales-Malvales View MSA
124340673 5266 SBM View MSA
124246059 5268 Malvidae View MSA
124065888 5270 Rosid View MSA
123751146 5271 Pentapetalae View MSA
122796632 5272 Eudicot View MSA
122045333 5273 Angiosperm View MSA
121350655 5274 Embryophyte View MSA
123428779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain