Gene : Carub.0005s2079 C. rubella v1.1
Defline:  (1 of 1) PTHR31852//PTHR31852:SF43 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Genomic Order:  2079
Name:  ? Carub.0005s2079 Secondary Identifier:  ? PAC:39226204
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2079 0.5kb upstream 0.5kb upstream 1510 true scaffold_5: 10238247-10239756 Capsella rubella
Carub.0005s2079 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10238247-10238746 Capsella rubella
Carub.0005s2079 0.5kb downstream 0.5kb downstream 1510 true scaffold_5: 10238747-10240256 Capsella rubella
Carub.0005s2079 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10239757-10240256 Capsella rubella
Carub.0005s2079 1.0kb upstream 1.0kb upstream 2010 true scaffold_5: 10237747-10239756 Capsella rubella
Carub.0005s2079 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10237747-10238746 Capsella rubella
Carub.0005s2079 1.0kb downstream 1.0kb downstream 2010 true scaffold_5: 10238747-10240756 Capsella rubella
Carub.0005s2079 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10239757-10240756 Capsella rubella
Carub.0005s2079 2.0kb upstream 2.0kb upstream 3010 true scaffold_5: 10236747-10239756 Capsella rubella
Carub.0005s2079 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10236747-10238746 Capsella rubella
Carub.0005s2079 2.0kb downstream 2.0kb downstream 3010 true scaffold_5: 10238747-10241756 Capsella rubella
Carub.0005s2079 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10239757-10241756 Capsella rubella
Carub.0005s2079 5.0kb upstream 5.0kb upstream 6010 true scaffold_5: 10233747-10239756 Capsella rubella
Carub.0005s2079 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10233747-10238746 Capsella rubella
Carub.0005s2079 5.0kb downstream 5.0kb downstream 6010 true scaffold_5: 10238747-10244756 Capsella rubella
Carub.0005s2079 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10239757-10244756 Capsella rubella
Carub.0005s2079 10.0kb upstream 10.0kb upstream 11010 true scaffold_5: 10228747-10239756 Capsella rubella
Carub.0005s2079 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10228747-10238746 Capsella rubella
Carub.0005s2079 10.0kb downstream 10.0kb downstream 11010 true scaffold_5: 10238747-10249756 Capsella rubella
Carub.0005s2079 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10239757-10249756 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373642 5261 Brassicaceae View MSA
123832801 5264 Brassicales-Malvales View MSA
124344084 5266 SBM View MSA
124253171 5268 Malvidae View MSA
124068918 5270 Rosid View MSA
123743107 5271 Pentapetalae View MSA
122794839 5272 Eudicot View MSA
122049772 5273 Angiosperm View MSA
121350992 5274 Embryophyte View MSA
123381962 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain