Gene : Carub.0005s2111 C. rubella v1.1
Defline:  (1 of 1) PTHR10535//PTHR10535:SF5 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 // DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5C Genomic Order:  2111
Name:  ? Carub.0005s2111 Secondary Identifier:  ? PAC:39226388
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2111 0.5kb upstream 0.5kb upstream 2505 true scaffold_5: 10364067-10366571 Capsella rubella
Carub.0005s2111 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10364067-10364566 Capsella rubella
Carub.0005s2111 0.5kb downstream 0.5kb downstream 2505 true scaffold_5: 10364567-10367071 Capsella rubella
Carub.0005s2111 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10366572-10367071 Capsella rubella
Carub.0005s2111 1.0kb upstream 1.0kb upstream 3005 true scaffold_5: 10363567-10366571 Capsella rubella
Carub.0005s2111 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10363567-10364566 Capsella rubella
Carub.0005s2111 1.0kb downstream 1.0kb downstream 3005 true scaffold_5: 10364567-10367571 Capsella rubella
Carub.0005s2111 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10366572-10367571 Capsella rubella
Carub.0005s2111 2.0kb upstream 2.0kb upstream 4005 true scaffold_5: 10362567-10366571 Capsella rubella
Carub.0005s2111 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10362567-10364566 Capsella rubella
Carub.0005s2111 2.0kb downstream 2.0kb downstream 4005 true scaffold_5: 10364567-10368571 Capsella rubella
Carub.0005s2111 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10366572-10368571 Capsella rubella
Carub.0005s2111 5.0kb upstream 5.0kb upstream 7005 true scaffold_5: 10359567-10366571 Capsella rubella
Carub.0005s2111 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10359567-10364566 Capsella rubella
Carub.0005s2111 5.0kb downstream 5.0kb downstream 7005 true scaffold_5: 10364567-10371571 Capsella rubella
Carub.0005s2111 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10366572-10371571 Capsella rubella
Carub.0005s2111 10.0kb upstream 10.0kb upstream 12005 true scaffold_5: 10354567-10366571 Capsella rubella
Carub.0005s2111 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10354567-10364566 Capsella rubella
Carub.0005s2111 10.0kb downstream 10.0kb downstream 12005 true scaffold_5: 10364567-10376571 Capsella rubella
Carub.0005s2111 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10366572-10376571 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366690 5261 Brassicaceae View MSA
123831164 5264 Brassicales-Malvales View MSA
124337139 5266 SBM View MSA
124244665 5268 Malvidae View MSA
124060550 5270 Rosid View MSA
123741650 5271 Pentapetalae View MSA
122792617 5272 Eudicot View MSA
122051300 5273 Angiosperm View MSA
121352511 5274 Embryophyte View MSA
123382830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain