Gene : Carub.0005s2146 C. rubella v1.1
Defline:  (1 of 1) PTHR23315//PTHR23315:SF111 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 14 Genomic Order:  2146
Name:  ? Carub.0005s2146 Secondary Identifier:  ? PAC:39224051
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7511 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2146 0.5kb upstream 0.5kb upstream 3240 true scaffold_5: 10491135-10494374 Capsella rubella
Carub.0005s2146 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10491135-10491634 Capsella rubella
Carub.0005s2146 0.5kb downstream 0.5kb downstream 3240 true scaffold_5: 10491635-10494874 Capsella rubella
Carub.0005s2146 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10494375-10494874 Capsella rubella
Carub.0005s2146 1.0kb upstream 1.0kb upstream 3740 true scaffold_5: 10490635-10494374 Capsella rubella
Carub.0005s2146 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10490635-10491634 Capsella rubella
Carub.0005s2146 1.0kb downstream 1.0kb downstream 3740 true scaffold_5: 10491635-10495374 Capsella rubella
Carub.0005s2146 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10494375-10495374 Capsella rubella
Carub.0005s2146 2.0kb upstream 2.0kb upstream 4740 true scaffold_5: 10489635-10494374 Capsella rubella
Carub.0005s2146 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10489635-10491634 Capsella rubella
Carub.0005s2146 2.0kb downstream 2.0kb downstream 4740 true scaffold_5: 10491635-10496374 Capsella rubella
Carub.0005s2146 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10494375-10496374 Capsella rubella
Carub.0005s2146 5.0kb upstream 5.0kb upstream 7740 true scaffold_5: 10486635-10494374 Capsella rubella
Carub.0005s2146 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10486635-10491634 Capsella rubella
Carub.0005s2146 5.0kb downstream 5.0kb downstream 7740 true scaffold_5: 10491635-10499374 Capsella rubella
Carub.0005s2146 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10494375-10499374 Capsella rubella
Carub.0005s2146 10.0kb upstream 10.0kb upstream 12740 true scaffold_5: 10481635-10494374 Capsella rubella
Carub.0005s2146 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10481635-10491634 Capsella rubella
Carub.0005s2146 10.0kb downstream 10.0kb downstream 12740 true scaffold_5: 10491635-10504374 Capsella rubella
Carub.0005s2146 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10494375-10504374 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363065 5261 Brassicaceae View MSA
123830304 5264 Brassicales-Malvales View MSA
124337480 5266 SBM View MSA
124237370 5268 Malvidae View MSA
124065418 5270 Rosid View MSA
123739906 5271 Pentapetalae View MSA
122790994 5272 Eudicot View MSA
122042286 5273 Angiosperm View MSA
121349135 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain