Gene : Carub.0005s2385 C. rubella v1.1
Defline:  (1 of 1) 4.4.1.8 - Cystathionine beta-lyase / Cystine lyase Genomic Order:  2385
Name:  ? Carub.0005s2385 Secondary Identifier:  ? PAC:39226636
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6936 Capsella rubella pathologic  
Crubella PWY-702 Capsella rubella pathologic  
Crubella PWY-724 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2385 0.5kb upstream 0.5kb upstream 3353 true scaffold_5: 11381219-11384571 Capsella rubella
Carub.0005s2385 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 11384072-11384571 Capsella rubella
Carub.0005s2385 0.5kb downstream 0.5kb downstream 3353 true scaffold_5: 11380719-11384071 Capsella rubella
Carub.0005s2385 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 11380719-11381218 Capsella rubella
Carub.0005s2385 1.0kb upstream 1.0kb upstream 3853 true scaffold_5: 11381219-11385071 Capsella rubella
Carub.0005s2385 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 11384072-11385071 Capsella rubella
Carub.0005s2385 1.0kb downstream 1.0kb downstream 3853 true scaffold_5: 11380219-11384071 Capsella rubella
Carub.0005s2385 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 11380219-11381218 Capsella rubella
Carub.0005s2385 2.0kb upstream 2.0kb upstream 4853 true scaffold_5: 11381219-11386071 Capsella rubella
Carub.0005s2385 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 11384072-11386071 Capsella rubella
Carub.0005s2385 2.0kb downstream 2.0kb downstream 4853 true scaffold_5: 11379219-11384071 Capsella rubella
Carub.0005s2385 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 11379219-11381218 Capsella rubella
Carub.0005s2385 5.0kb upstream 5.0kb upstream 7853 true scaffold_5: 11381219-11389071 Capsella rubella
Carub.0005s2385 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 11384072-11389071 Capsella rubella
Carub.0005s2385 5.0kb downstream 5.0kb downstream 7853 true scaffold_5: 11376219-11384071 Capsella rubella
Carub.0005s2385 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 11376219-11381218 Capsella rubella
Carub.0005s2385 10.0kb upstream 10.0kb upstream 12853 true scaffold_5: 11381219-11394071 Capsella rubella
Carub.0005s2385 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 11384072-11394071 Capsella rubella
Carub.0005s2385 10.0kb downstream 10.0kb downstream 12853 true scaffold_5: 11371219-11384071 Capsella rubella
Carub.0005s2385 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 11371219-11381218 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041211 5273 Angiosperm View MSA
122376873 5261 Brassicaceae View MSA
123832648 5264 Brassicales-Malvales View MSA
124345273 5266 SBM View MSA
124239885 5268 Malvidae View MSA
124062752 5270 Rosid View MSA
123751787 5271 Pentapetalae View MSA
122792966 5272 Eudicot View MSA
121349443 5274 Embryophyte View MSA
123424610 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain