Gene : Carub.0005s2374 C. rubella v1.1
Defline:  (1 of 1) 2.1.1.257 - tRNA (pseudouridine(54)-N(1))-methyltransferase / M(1)-Psi methyltransferase Genomic Order:  2374
Name:  ? Carub.0005s2374 Secondary Identifier:  ? PAC:39226785
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2374 0.5kb upstream 0.5kb upstream 2478 true scaffold_5: 11338875-11341352 Capsella rubella
Carub.0005s2374 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 11338875-11339374 Capsella rubella
Carub.0005s2374 0.5kb downstream 0.5kb downstream 2478 true scaffold_5: 11339375-11341852 Capsella rubella
Carub.0005s2374 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 11341353-11341852 Capsella rubella
Carub.0005s2374 1.0kb upstream 1.0kb upstream 2978 true scaffold_5: 11338375-11341352 Capsella rubella
Carub.0005s2374 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 11338375-11339374 Capsella rubella
Carub.0005s2374 1.0kb downstream 1.0kb downstream 2978 true scaffold_5: 11339375-11342352 Capsella rubella
Carub.0005s2374 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 11341353-11342352 Capsella rubella
Carub.0005s2374 2.0kb upstream 2.0kb upstream 3978 true scaffold_5: 11337375-11341352 Capsella rubella
Carub.0005s2374 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 11337375-11339374 Capsella rubella
Carub.0005s2374 2.0kb downstream 2.0kb downstream 3978 true scaffold_5: 11339375-11343352 Capsella rubella
Carub.0005s2374 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 11341353-11343352 Capsella rubella
Carub.0005s2374 5.0kb upstream 5.0kb upstream 6978 true scaffold_5: 11334375-11341352 Capsella rubella
Carub.0005s2374 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 11334375-11339374 Capsella rubella
Carub.0005s2374 5.0kb downstream 5.0kb downstream 6978 true scaffold_5: 11339375-11346352 Capsella rubella
Carub.0005s2374 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 11341353-11346352 Capsella rubella
Carub.0005s2374 10.0kb upstream 10.0kb upstream 11978 true scaffold_5: 11329375-11341352 Capsella rubella
Carub.0005s2374 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 11329375-11339374 Capsella rubella
Carub.0005s2374 10.0kb downstream 10.0kb downstream 11978 true scaffold_5: 11339375-11351352 Capsella rubella
Carub.0005s2374 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 11341353-11351352 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365653 5261 Brassicaceae View MSA
123834900 5264 Brassicales-Malvales View MSA
124341453 5266 SBM View MSA
124247817 5268 Malvidae View MSA
124066897 5270 Rosid View MSA
123749345 5271 Pentapetalae View MSA
122789424 5272 Eudicot View MSA
122046063 5273 Angiosperm View MSA
121345370 5274 Embryophyte View MSA
123425050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain