Gene : Carub.0005s2465 C. rubella v1.1
Defline:  (1 of 1) PTHR31339:SF10 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Genomic Order:  2465
Name:  ? Carub.0005s2465 Secondary Identifier:  ? PAC:39225539
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2465 0.5kb upstream 0.5kb upstream 2328 true scaffold_5: 11686641-11688968 Capsella rubella
Carub.0005s2465 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 11688469-11688968 Capsella rubella
Carub.0005s2465 0.5kb downstream 0.5kb downstream 2328 true scaffold_5: 11686141-11688468 Capsella rubella
Carub.0005s2465 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 11686141-11686640 Capsella rubella
Carub.0005s2465 1.0kb upstream 1.0kb upstream 2828 true scaffold_5: 11686641-11689468 Capsella rubella
Carub.0005s2465 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 11688469-11689468 Capsella rubella
Carub.0005s2465 1.0kb downstream 1.0kb downstream 2828 true scaffold_5: 11685641-11688468 Capsella rubella
Carub.0005s2465 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 11685641-11686640 Capsella rubella
Carub.0005s2465 2.0kb upstream 2.0kb upstream 3828 true scaffold_5: 11686641-11690468 Capsella rubella
Carub.0005s2465 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 11688469-11690468 Capsella rubella
Carub.0005s2465 2.0kb downstream 2.0kb downstream 3828 true scaffold_5: 11684641-11688468 Capsella rubella
Carub.0005s2465 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 11684641-11686640 Capsella rubella
Carub.0005s2465 5.0kb upstream 5.0kb upstream 6828 true scaffold_5: 11686641-11693468 Capsella rubella
Carub.0005s2465 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 11688469-11693468 Capsella rubella
Carub.0005s2465 5.0kb downstream 5.0kb downstream 6828 true scaffold_5: 11681641-11688468 Capsella rubella
Carub.0005s2465 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 11681641-11686640 Capsella rubella
Carub.0005s2465 10.0kb upstream 10.0kb upstream 11828 true scaffold_5: 11686641-11698468 Capsella rubella
Carub.0005s2465 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 11688469-11698468 Capsella rubella
Carub.0005s2465 10.0kb downstream 10.0kb downstream 11828 true scaffold_5: 11676641-11688468 Capsella rubella
Carub.0005s2465 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 11676641-11686640 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369434 5261 Brassicaceae View MSA
123829316 5264 Brassicales-Malvales View MSA
124344203 5266 SBM View MSA
124248778 5268 Malvidae View MSA
124067071 5270 Rosid View MSA
123738878 5271 Pentapetalae View MSA
122786031 5272 Eudicot View MSA
122041553 5273 Angiosperm View MSA
121343864 5274 Embryophyte View MSA
123425677 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain