Gene : Carub.0005s2497 C. rubella v1.1
Defline:  (1 of 2) PTHR13301//PTHR13301:SF69 - X-BOX TRANSCRIPTION FACTOR-RELATED // BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  2497
Name:  ? Carub.0005s2497 Secondary Identifier:  ? PAC:39224119
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2497 0.5kb upstream 0.5kb upstream 2848 true scaffold_5: 11808477-11811324 Capsella rubella
Carub.0005s2497 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 11810825-11811324 Capsella rubella
Carub.0005s2497 0.5kb downstream 0.5kb downstream 2848 true scaffold_5: 11807977-11810824 Capsella rubella
Carub.0005s2497 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 11807977-11808476 Capsella rubella
Carub.0005s2497 1.0kb upstream 1.0kb upstream 3348 true scaffold_5: 11808477-11811824 Capsella rubella
Carub.0005s2497 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 11810825-11811824 Capsella rubella
Carub.0005s2497 1.0kb downstream 1.0kb downstream 3348 true scaffold_5: 11807477-11810824 Capsella rubella
Carub.0005s2497 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 11807477-11808476 Capsella rubella
Carub.0005s2497 2.0kb upstream 2.0kb upstream 4348 true scaffold_5: 11808477-11812824 Capsella rubella
Carub.0005s2497 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 11810825-11812824 Capsella rubella
Carub.0005s2497 2.0kb downstream 2.0kb downstream 4348 true scaffold_5: 11806477-11810824 Capsella rubella
Carub.0005s2497 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 11806477-11808476 Capsella rubella
Carub.0005s2497 5.0kb upstream 5.0kb upstream 7348 true scaffold_5: 11808477-11815824 Capsella rubella
Carub.0005s2497 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 11810825-11815824 Capsella rubella
Carub.0005s2497 5.0kb downstream 5.0kb downstream 7348 true scaffold_5: 11803477-11810824 Capsella rubella
Carub.0005s2497 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 11803477-11808476 Capsella rubella
Carub.0005s2497 10.0kb upstream 10.0kb upstream 12348 true scaffold_5: 11808477-11820824 Capsella rubella
Carub.0005s2497 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 11810825-11820824 Capsella rubella
Carub.0005s2497 10.0kb downstream 10.0kb downstream 12348 true scaffold_5: 11798477-11810824 Capsella rubella
Carub.0005s2497 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 11798477-11808476 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363172 5261 Brassicaceae View MSA
123837238 5264 Brassicales-Malvales View MSA
124347537 5266 SBM View MSA
124249708 5268 Malvidae View MSA
124069562 5270 Rosid View MSA
123743912 5271 Pentapetalae View MSA
122795222 5272 Eudicot View MSA
122050471 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350837 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain