Gene : Carub.0005s2264 C. rubella v1.1
Defline:  (1 of 1) 2.1.1.148//4.1.3.27 - Thymidylate synthase (FAD) / Flavin dependent thymidylate synthase // Anthranilate synthase Genomic Order:  2264
Name:  ? Carub.0005s2264 Secondary Identifier:  ? PAC:39224813
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6545 Capsella rubella pathologic  
Crubella TRPSYN-PWY Capsella rubella pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2264 0.5kb upstream 0.5kb upstream 3368 true scaffold_5: 10952133-10955500 Capsella rubella
Carub.0005s2264 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 10952133-10952632 Capsella rubella
Carub.0005s2264 0.5kb downstream 0.5kb downstream 3368 true scaffold_5: 10952633-10956000 Capsella rubella
Carub.0005s2264 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 10955501-10956000 Capsella rubella
Carub.0005s2264 1.0kb upstream 1.0kb upstream 3868 true scaffold_5: 10951633-10955500 Capsella rubella
Carub.0005s2264 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 10951633-10952632 Capsella rubella
Carub.0005s2264 1.0kb downstream 1.0kb downstream 3868 true scaffold_5: 10952633-10956500 Capsella rubella
Carub.0005s2264 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 10955501-10956500 Capsella rubella
Carub.0005s2264 2.0kb upstream 2.0kb upstream 4868 true scaffold_5: 10950633-10955500 Capsella rubella
Carub.0005s2264 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 10950633-10952632 Capsella rubella
Carub.0005s2264 2.0kb downstream 2.0kb downstream 4868 true scaffold_5: 10952633-10957500 Capsella rubella
Carub.0005s2264 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 10955501-10957500 Capsella rubella
Carub.0005s2264 5.0kb upstream 5.0kb upstream 7868 true scaffold_5: 10947633-10955500 Capsella rubella
Carub.0005s2264 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 10947633-10952632 Capsella rubella
Carub.0005s2264 5.0kb downstream 5.0kb downstream 7868 true scaffold_5: 10952633-10960500 Capsella rubella
Carub.0005s2264 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 10955501-10960500 Capsella rubella
Carub.0005s2264 10.0kb upstream 10.0kb upstream 12868 true scaffold_5: 10942633-10955500 Capsella rubella
Carub.0005s2264 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 10942633-10952632 Capsella rubella
Carub.0005s2264 10.0kb downstream 10.0kb downstream 12868 true scaffold_5: 10952633-10965500 Capsella rubella
Carub.0005s2264 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 10955501-10965500 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338753 5261 Brassicaceae View MSA
123838470 5264 Brassicales-Malvales View MSA
124346682 5266 SBM View MSA
124240153 5268 Malvidae View MSA
124064882 5270 Rosid View MSA
123744113 5271 Pentapetalae View MSA
122793457 5272 Eudicot View MSA
122041793 5273 Angiosperm View MSA
121344938 5274 Embryophyte View MSA
123424277 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain