Gene : Carub.0005s2326 C. rubella v1.1
Defline:  (1 of 1) PTHR23089:SF12 - HIS TRIAD FAMILY PROTEIN 3 Genomic Order:  2326
Name:  ? Carub.0005s2326 Secondary Identifier:  ? PAC:39226066
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2326 0.5kb upstream 0.5kb upstream 2305 true scaffold_5: 11184690-11186994 Capsella rubella
Carub.0005s2326 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 11184690-11185189 Capsella rubella
Carub.0005s2326 0.5kb downstream 0.5kb downstream 2305 true scaffold_5: 11185190-11187494 Capsella rubella
Carub.0005s2326 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 11186995-11187494 Capsella rubella
Carub.0005s2326 1.0kb upstream 1.0kb upstream 2805 true scaffold_5: 11184190-11186994 Capsella rubella
Carub.0005s2326 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 11184190-11185189 Capsella rubella
Carub.0005s2326 1.0kb downstream 1.0kb downstream 2805 true scaffold_5: 11185190-11187994 Capsella rubella
Carub.0005s2326 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 11186995-11187994 Capsella rubella
Carub.0005s2326 2.0kb upstream 2.0kb upstream 3805 true scaffold_5: 11183190-11186994 Capsella rubella
Carub.0005s2326 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 11183190-11185189 Capsella rubella
Carub.0005s2326 2.0kb downstream 2.0kb downstream 3805 true scaffold_5: 11185190-11188994 Capsella rubella
Carub.0005s2326 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 11186995-11188994 Capsella rubella
Carub.0005s2326 5.0kb upstream 5.0kb upstream 6805 true scaffold_5: 11180190-11186994 Capsella rubella
Carub.0005s2326 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 11180190-11185189 Capsella rubella
Carub.0005s2326 5.0kb downstream 5.0kb downstream 6805 true scaffold_5: 11185190-11191994 Capsella rubella
Carub.0005s2326 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 11186995-11191994 Capsella rubella
Carub.0005s2326 10.0kb upstream 10.0kb upstream 11805 true scaffold_5: 11175190-11186994 Capsella rubella
Carub.0005s2326 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 11175190-11185189 Capsella rubella
Carub.0005s2326 10.0kb downstream 10.0kb downstream 11805 true scaffold_5: 11185190-11196994 Capsella rubella
Carub.0005s2326 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 11186995-11196994 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361055 5261 Brassicaceae View MSA
123833585 5264 Brassicales-Malvales View MSA
124339014 5266 SBM View MSA
124240421 5268 Malvidae View MSA
124066707 5270 Rosid View MSA
123736753 5271 Pentapetalae View MSA
122786513 5272 Eudicot View MSA
122041956 5273 Angiosperm View MSA
121349409 5274 Embryophyte View MSA
123425482 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain