Gene : Carub.0005s2351 C. rubella v1.1
Defline:  (1 of 2) PTHR12565//PTHR12565:SF158 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BHLH106-RELATED Genomic Order:  2351
Name:  ? Carub.0005s2351 Secondary Identifier:  ? PAC:39226508
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2351 0.5kb upstream 0.5kb upstream 2040 true scaffold_5: 11271163-11273202 Capsella rubella
Carub.0005s2351 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 11272703-11273202 Capsella rubella
Carub.0005s2351 0.5kb downstream 0.5kb downstream 2040 true scaffold_5: 11270663-11272702 Capsella rubella
Carub.0005s2351 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 11270663-11271162 Capsella rubella
Carub.0005s2351 1.0kb upstream 1.0kb upstream 2540 true scaffold_5: 11271163-11273702 Capsella rubella
Carub.0005s2351 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 11272703-11273702 Capsella rubella
Carub.0005s2351 1.0kb downstream 1.0kb downstream 2540 true scaffold_5: 11270163-11272702 Capsella rubella
Carub.0005s2351 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 11270163-11271162 Capsella rubella
Carub.0005s2351 2.0kb upstream 2.0kb upstream 3540 true scaffold_5: 11271163-11274702 Capsella rubella
Carub.0005s2351 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 11272703-11274702 Capsella rubella
Carub.0005s2351 2.0kb downstream 2.0kb downstream 3540 true scaffold_5: 11269163-11272702 Capsella rubella
Carub.0005s2351 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 11269163-11271162 Capsella rubella
Carub.0005s2351 5.0kb upstream 5.0kb upstream 6540 true scaffold_5: 11271163-11277702 Capsella rubella
Carub.0005s2351 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 11272703-11277702 Capsella rubella
Carub.0005s2351 5.0kb downstream 5.0kb downstream 6540 true scaffold_5: 11266163-11272702 Capsella rubella
Carub.0005s2351 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 11266163-11271162 Capsella rubella
Carub.0005s2351 10.0kb upstream 10.0kb upstream 11540 true scaffold_5: 11271163-11282702 Capsella rubella
Carub.0005s2351 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 11272703-11282702 Capsella rubella
Carub.0005s2351 10.0kb downstream 10.0kb downstream 11540 true scaffold_5: 11261163-11272702 Capsella rubella
Carub.0005s2351 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 11261163-11271162 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368556 5261 Brassicaceae View MSA
123799602 5264 Brassicales-Malvales View MSA
124297104 5266 SBM View MSA
124149079 5268 Malvidae View MSA
124070822 5270 Rosid View MSA
123748515 5271 Pentapetalae View MSA
122793981 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain