Gene : Carub.0005s2371 C. rubella v1.1
Defline:  (1 of 5) PTHR13935:SF41 - ACHAETE-SCUTE HOMOLOG 3 Genomic Order:  2371
Name:  ? Carub.0005s2371 Secondary Identifier:  ? PAC:39226244
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2371 0.5kb upstream 0.5kb upstream 1504 true scaffold_5: 11331059-11332562 Capsella rubella
Carub.0005s2371 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 11332063-11332562 Capsella rubella
Carub.0005s2371 0.5kb downstream 0.5kb downstream 1504 true scaffold_5: 11330559-11332062 Capsella rubella
Carub.0005s2371 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 11330559-11331058 Capsella rubella
Carub.0005s2371 1.0kb upstream 1.0kb upstream 2004 true scaffold_5: 11331059-11333062 Capsella rubella
Carub.0005s2371 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 11332063-11333062 Capsella rubella
Carub.0005s2371 1.0kb downstream 1.0kb downstream 2004 true scaffold_5: 11330059-11332062 Capsella rubella
Carub.0005s2371 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 11330059-11331058 Capsella rubella
Carub.0005s2371 2.0kb upstream 2.0kb upstream 3004 true scaffold_5: 11331059-11334062 Capsella rubella
Carub.0005s2371 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 11332063-11334062 Capsella rubella
Carub.0005s2371 2.0kb downstream 2.0kb downstream 3004 true scaffold_5: 11329059-11332062 Capsella rubella
Carub.0005s2371 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 11329059-11331058 Capsella rubella
Carub.0005s2371 5.0kb upstream 5.0kb upstream 6004 true scaffold_5: 11331059-11337062 Capsella rubella
Carub.0005s2371 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 11332063-11337062 Capsella rubella
Carub.0005s2371 5.0kb downstream 5.0kb downstream 6004 true scaffold_5: 11326059-11332062 Capsella rubella
Carub.0005s2371 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 11326059-11331058 Capsella rubella
Carub.0005s2371 10.0kb upstream 10.0kb upstream 11004 true scaffold_5: 11331059-11342062 Capsella rubella
Carub.0005s2371 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 11332063-11342062 Capsella rubella
Carub.0005s2371 10.0kb downstream 10.0kb downstream 11004 true scaffold_5: 11321059-11332062 Capsella rubella
Carub.0005s2371 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 11321059-11331058 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380032 5261 Brassicaceae View MSA
123836801 5264 Brassicales-Malvales View MSA
124322205 5266 SBM View MSA
124254233 5268 Malvidae View MSA
124071325 5270 Rosid View MSA
123751421 5271 Pentapetalae View MSA
122790904 5272 Eudicot View MSA
122049440 5273 Angiosperm View MSA
121311403 5274 Embryophyte View MSA
123348704 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain