Gene : Carub.0005s2676 C. rubella v1.1
Defline:  (1 of 2) PTHR31251//PTHR31251:SF8 - FAMILY NOT NAMED // SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED Genomic Order:  2676
Name:  ? Carub.0005s2676 Secondary Identifier:  ? PAC:39226893
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2676 0.5kb upstream 0.5kb upstream 4639 true scaffold_5: 12459294-12463932 Capsella rubella
Carub.0005s2676 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 12463433-12463932 Capsella rubella
Carub.0005s2676 0.5kb downstream 0.5kb downstream 4639 true scaffold_5: 12458794-12463432 Capsella rubella
Carub.0005s2676 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 12458794-12459293 Capsella rubella
Carub.0005s2676 1.0kb upstream 1.0kb upstream 5139 true scaffold_5: 12459294-12464432 Capsella rubella
Carub.0005s2676 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 12463433-12464432 Capsella rubella
Carub.0005s2676 1.0kb downstream 1.0kb downstream 5139 true scaffold_5: 12458294-12463432 Capsella rubella
Carub.0005s2676 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 12458294-12459293 Capsella rubella
Carub.0005s2676 2.0kb upstream 2.0kb upstream 6139 true scaffold_5: 12459294-12465432 Capsella rubella
Carub.0005s2676 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 12463433-12465432 Capsella rubella
Carub.0005s2676 2.0kb downstream 2.0kb downstream 6139 true scaffold_5: 12457294-12463432 Capsella rubella
Carub.0005s2676 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 12457294-12459293 Capsella rubella
Carub.0005s2676 5.0kb upstream 5.0kb upstream 9139 true scaffold_5: 12459294-12468432 Capsella rubella
Carub.0005s2676 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 12463433-12468432 Capsella rubella
Carub.0005s2676 5.0kb downstream 5.0kb downstream 9139 true scaffold_5: 12454294-12463432 Capsella rubella
Carub.0005s2676 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 12454294-12459293 Capsella rubella
Carub.0005s2676 10.0kb upstream 10.0kb upstream 14139 true scaffold_5: 12459294-12473432 Capsella rubella
Carub.0005s2676 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 12463433-12473432 Capsella rubella
Carub.0005s2676 10.0kb downstream 10.0kb downstream 14139 true scaffold_5: 12449294-12463432 Capsella rubella
Carub.0005s2676 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 12449294-12459293 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343263 5261 Brassicaceae View MSA
123837050 5264 Brassicales-Malvales View MSA
124344494 5266 SBM View MSA
124254656 5268 Malvidae View MSA
124070575 5270 Rosid View MSA
123744232 5271 Pentapetalae View MSA
122791622 5272 Eudicot View MSA
122044652 5273 Angiosperm View MSA
121350416 5274 Embryophyte View MSA
123426856 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain