Gene : Carub.0001s4419 C. rubella v1.1
Defline:  (1 of 1) K08905 - photosystem I subunit V (psaG) Genomic Order:  4419
Name:  ? Carub.0001s4419 Secondary Identifier:  ? PAC:39231568
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PHOTOALL-PWY Capsella rubella pathologic  
Crubella PWY-101 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s4419 0.5kb upstream 0.5kb upstream 1612 true scaffold_1: 19354919-19356530 Capsella rubella
Carub.0001s4419 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 19356031-19356530 Capsella rubella
Carub.0001s4419 0.5kb downstream 0.5kb downstream 1612 true scaffold_1: 19354419-19356030 Capsella rubella
Carub.0001s4419 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 19354419-19354918 Capsella rubella
Carub.0001s4419 1.0kb upstream 1.0kb upstream 2112 true scaffold_1: 19354919-19357030 Capsella rubella
Carub.0001s4419 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 19356031-19357030 Capsella rubella
Carub.0001s4419 1.0kb downstream 1.0kb downstream 2112 true scaffold_1: 19353919-19356030 Capsella rubella
Carub.0001s4419 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 19353919-19354918 Capsella rubella
Carub.0001s4419 2.0kb upstream 2.0kb upstream 3112 true scaffold_1: 19354919-19358030 Capsella rubella
Carub.0001s4419 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 19356031-19358030 Capsella rubella
Carub.0001s4419 2.0kb downstream 2.0kb downstream 3112 true scaffold_1: 19352919-19356030 Capsella rubella
Carub.0001s4419 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 19352919-19354918 Capsella rubella
Carub.0001s4419 5.0kb upstream 5.0kb upstream 6112 true scaffold_1: 19354919-19361030 Capsella rubella
Carub.0001s4419 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 19356031-19361030 Capsella rubella
Carub.0001s4419 5.0kb downstream 5.0kb downstream 6112 true scaffold_1: 19349919-19356030 Capsella rubella
Carub.0001s4419 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 19349919-19354918 Capsella rubella
Carub.0001s4419 10.0kb upstream 10.0kb upstream 11112 true scaffold_1: 19354919-19366030 Capsella rubella
Carub.0001s4419 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 19356031-19366030 Capsella rubella
Carub.0001s4419 10.0kb downstream 10.0kb downstream 11112 true scaffold_1: 19344919-19356030 Capsella rubella
Carub.0001s4419 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 19344919-19354918 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363876 5261 Brassicaceae View MSA
123841347 5264 Brassicales-Malvales View MSA
124341917 5266 SBM View MSA
124237433 5268 Malvidae View MSA
124067062 5270 Rosid View MSA
123737989 5271 Pentapetalae View MSA
122787886 5272 Eudicot View MSA
122046392 5273 Angiosperm View MSA
121348949 5274 Embryophyte View MSA
123425419 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain