Gene : Carub.0005s2685 C. rubella v1.1
Defline:  (1 of 27) K01188 - beta-glucosidase (E3.2.1.21) Genomic Order:  2685
Name:  ? Carub.0005s2685 Secondary Identifier:  ? PAC:39225945
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5176 Capsella rubella pathologic  
Crubella PWY-7089 Capsella rubella pathologic  
Crubella PWY-7091 Capsella rubella pathologic  
Crubella PWY-7092 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2685 0.5kb upstream 0.5kb upstream 3559 true scaffold_5: 12502375-12505933 Capsella rubella
Carub.0005s2685 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 12502375-12502874 Capsella rubella
Carub.0005s2685 0.5kb downstream 0.5kb downstream 3559 true scaffold_5: 12502875-12506433 Capsella rubella
Carub.0005s2685 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 12505934-12506433 Capsella rubella
Carub.0005s2685 1.0kb upstream 1.0kb upstream 4059 true scaffold_5: 12501875-12505933 Capsella rubella
Carub.0005s2685 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 12501875-12502874 Capsella rubella
Carub.0005s2685 1.0kb downstream 1.0kb downstream 4059 true scaffold_5: 12502875-12506933 Capsella rubella
Carub.0005s2685 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 12505934-12506933 Capsella rubella
Carub.0005s2685 2.0kb upstream 2.0kb upstream 5059 true scaffold_5: 12500875-12505933 Capsella rubella
Carub.0005s2685 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 12500875-12502874 Capsella rubella
Carub.0005s2685 2.0kb downstream 2.0kb downstream 5059 true scaffold_5: 12502875-12507933 Capsella rubella
Carub.0005s2685 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 12505934-12507933 Capsella rubella
Carub.0005s2685 5.0kb upstream 5.0kb upstream 8059 true scaffold_5: 12497875-12505933 Capsella rubella
Carub.0005s2685 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 12497875-12502874 Capsella rubella
Carub.0005s2685 5.0kb downstream 5.0kb downstream 8059 true scaffold_5: 12502875-12510933 Capsella rubella
Carub.0005s2685 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 12505934-12510933 Capsella rubella
Carub.0005s2685 10.0kb upstream 10.0kb upstream 13059 true scaffold_5: 12492875-12505933 Capsella rubella
Carub.0005s2685 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 12492875-12502874 Capsella rubella
Carub.0005s2685 10.0kb downstream 10.0kb downstream 13059 true scaffold_5: 12502875-12515933 Capsella rubella
Carub.0005s2685 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 12505934-12515933 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121691541 5273 Angiosperm View MSA
122361147 5261 Brassicaceae View MSA
123839918 5264 Brassicales-Malvales View MSA
124322666 5266 SBM View MSA
124252768 5268 Malvidae View MSA
124073758 5270 Rosid View MSA
123647504 5271 Pentapetalae View MSA
122681476 5272 Eudicot View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain