Gene : Carub.0005s2686 C. rubella v1.1
Defline:  (1 of 27) K01188 - beta-glucosidase (E3.2.1.21) Genomic Order:  2686
Name:  ? Carub.0005s2686 Secondary Identifier:  ? PAC:39226393
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5176 Capsella rubella pathologic  
Crubella PWY-7089 Capsella rubella pathologic  
Crubella PWY-7091 Capsella rubella pathologic  
Crubella PWY-7092 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2686 0.5kb upstream 0.5kb upstream 3923 true scaffold_5: 12506576-12510498 Capsella rubella
Carub.0005s2686 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 12506576-12507075 Capsella rubella
Carub.0005s2686 0.5kb downstream 0.5kb downstream 3923 true scaffold_5: 12507076-12510998 Capsella rubella
Carub.0005s2686 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 12510499-12510998 Capsella rubella
Carub.0005s2686 1.0kb upstream 1.0kb upstream 4423 true scaffold_5: 12506076-12510498 Capsella rubella
Carub.0005s2686 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 12506076-12507075 Capsella rubella
Carub.0005s2686 1.0kb downstream 1.0kb downstream 4423 true scaffold_5: 12507076-12511498 Capsella rubella
Carub.0005s2686 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 12510499-12511498 Capsella rubella
Carub.0005s2686 2.0kb upstream 2.0kb upstream 5423 true scaffold_5: 12505076-12510498 Capsella rubella
Carub.0005s2686 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 12505076-12507075 Capsella rubella
Carub.0005s2686 2.0kb downstream 2.0kb downstream 5423 true scaffold_5: 12507076-12512498 Capsella rubella
Carub.0005s2686 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 12510499-12512498 Capsella rubella
Carub.0005s2686 5.0kb upstream 5.0kb upstream 8423 true scaffold_5: 12502076-12510498 Capsella rubella
Carub.0005s2686 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 12502076-12507075 Capsella rubella
Carub.0005s2686 5.0kb downstream 5.0kb downstream 8423 true scaffold_5: 12507076-12515498 Capsella rubella
Carub.0005s2686 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 12510499-12515498 Capsella rubella
Carub.0005s2686 10.0kb upstream 10.0kb upstream 13423 true scaffold_5: 12497076-12510498 Capsella rubella
Carub.0005s2686 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 12497076-12507075 Capsella rubella
Carub.0005s2686 10.0kb downstream 10.0kb downstream 13423 true scaffold_5: 12507076-12520498 Capsella rubella
Carub.0005s2686 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 12510499-12520498 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360653 5261 Brassicaceae View MSA
123840541 5264 Brassicales-Malvales View MSA
124350500 5266 SBM View MSA
124252389 5268 Malvidae View MSA
124071856 5270 Rosid View MSA
123753517 5271 Pentapetalae View MSA
122797747 5272 Eudicot View MSA
122051599 5273 Angiosperm View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain