Gene : Carub.0001s4484 C. rubella v1.1
Defline:  (1 of 3) PTHR31989//PTHR31989:SF9 - FAMILY NOT NAMED // NAC DOMAIN CONTAINING PROTEIN 20-RELATED Genomic Order:  4484
Name:  ? Carub.0001s4484 Secondary Identifier:  ? PAC:39227146
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s4484 0.5kb upstream 0.5kb upstream 1735 true scaffold_1: 19592989-19594723 Capsella rubella
Carub.0001s4484 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 19592989-19593488 Capsella rubella
Carub.0001s4484 0.5kb downstream 0.5kb downstream 1735 true scaffold_1: 19593489-19595223 Capsella rubella
Carub.0001s4484 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 19594724-19595223 Capsella rubella
Carub.0001s4484 1.0kb upstream 1.0kb upstream 2235 true scaffold_1: 19592489-19594723 Capsella rubella
Carub.0001s4484 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 19592489-19593488 Capsella rubella
Carub.0001s4484 1.0kb downstream 1.0kb downstream 2235 true scaffold_1: 19593489-19595723 Capsella rubella
Carub.0001s4484 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 19594724-19595723 Capsella rubella
Carub.0001s4484 2.0kb upstream 2.0kb upstream 3235 true scaffold_1: 19591489-19594723 Capsella rubella
Carub.0001s4484 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 19591489-19593488 Capsella rubella
Carub.0001s4484 2.0kb downstream 2.0kb downstream 3235 true scaffold_1: 19593489-19596723 Capsella rubella
Carub.0001s4484 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 19594724-19596723 Capsella rubella
Carub.0001s4484 5.0kb upstream 5.0kb upstream 6235 true scaffold_1: 19588489-19594723 Capsella rubella
Carub.0001s4484 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 19588489-19593488 Capsella rubella
Carub.0001s4484 5.0kb downstream 5.0kb downstream 6235 true scaffold_1: 19593489-19599723 Capsella rubella
Carub.0001s4484 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 19594724-19599723 Capsella rubella
Carub.0001s4484 10.0kb upstream 10.0kb upstream 11235 true scaffold_1: 19583489-19594723 Capsella rubella
Carub.0001s4484 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 19583489-19593488 Capsella rubella
Carub.0001s4484 10.0kb downstream 10.0kb downstream 11235 true scaffold_1: 19593489-19604723 Capsella rubella
Carub.0001s4484 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 19594724-19604723 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369316 5261 Brassicaceae View MSA
123831410 5264 Brassicales-Malvales View MSA
124336849 5266 SBM View MSA
124249899 5268 Malvidae View MSA
124068910 5270 Rosid View MSA
123748777 5271 Pentapetalae View MSA
122796507 5272 Eudicot View MSA
122051475 5273 Angiosperm View MSA
121312510 5274 Embryophyte View MSA
123349677 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain