Gene : Carub.0001s4237 C. rubella v1.1
Defline:  (1 of 2) PTHR33785//PTHR33785:SF1 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, BAC CLONE:F4B12 Genomic Order:  4237
Name:  ? Carub.0001s4237 Secondary Identifier:  ? PAC:39228958
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s4237 0.5kb upstream 0.5kb upstream 1971 true scaffold_1: 18654366-18656336 Capsella rubella
Carub.0001s4237 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 18654366-18654865 Capsella rubella
Carub.0001s4237 0.5kb downstream 0.5kb downstream 1971 true scaffold_1: 18654866-18656836 Capsella rubella
Carub.0001s4237 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 18656337-18656836 Capsella rubella
Carub.0001s4237 1.0kb upstream 1.0kb upstream 2471 true scaffold_1: 18653866-18656336 Capsella rubella
Carub.0001s4237 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 18653866-18654865 Capsella rubella
Carub.0001s4237 1.0kb downstream 1.0kb downstream 2471 true scaffold_1: 18654866-18657336 Capsella rubella
Carub.0001s4237 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 18656337-18657336 Capsella rubella
Carub.0001s4237 2.0kb upstream 2.0kb upstream 3471 true scaffold_1: 18652866-18656336 Capsella rubella
Carub.0001s4237 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 18652866-18654865 Capsella rubella
Carub.0001s4237 2.0kb downstream 2.0kb downstream 3471 true scaffold_1: 18654866-18658336 Capsella rubella
Carub.0001s4237 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 18656337-18658336 Capsella rubella
Carub.0001s4237 5.0kb upstream 5.0kb upstream 6471 true scaffold_1: 18649866-18656336 Capsella rubella
Carub.0001s4237 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 18649866-18654865 Capsella rubella
Carub.0001s4237 5.0kb downstream 5.0kb downstream 6471 true scaffold_1: 18654866-18661336 Capsella rubella
Carub.0001s4237 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 18656337-18661336 Capsella rubella
Carub.0001s4237 10.0kb upstream 10.0kb upstream 11471 true scaffold_1: 18644866-18656336 Capsella rubella
Carub.0001s4237 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 18644866-18654865 Capsella rubella
Carub.0001s4237 10.0kb downstream 10.0kb downstream 11471 true scaffold_1: 18654866-18666336 Capsella rubella
Carub.0001s4237 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 18656337-18666336 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361008 5261 Brassicaceae View MSA
123841674 5264 Brassicales-Malvales View MSA
124338493 5266 SBM View MSA
124250739 5268 Malvidae View MSA
124063782 5270 Rosid View MSA
123750914 5271 Pentapetalae View MSA
122795249 5272 Eudicot View MSA
122048968 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain