Gene : Carub.0001s4266 C. rubella v1.1
Defline:  (1 of 2) PTHR31618:SF7 - MECHANOSENSITIVE ION CHANNEL PROTEIN 4-RELATED Genomic Order:  4266
Name:  ? Carub.0001s4266 Secondary Identifier:  ? PAC:39228085
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s4266 0.5kb upstream 0.5kb upstream 3688 true scaffold_1: 18789919-18793606 Capsella rubella
Carub.0001s4266 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 18789919-18790418 Capsella rubella
Carub.0001s4266 0.5kb downstream 0.5kb downstream 3688 true scaffold_1: 18790419-18794106 Capsella rubella
Carub.0001s4266 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 18793607-18794106 Capsella rubella
Carub.0001s4266 1.0kb upstream 1.0kb upstream 4188 true scaffold_1: 18789419-18793606 Capsella rubella
Carub.0001s4266 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 18789419-18790418 Capsella rubella
Carub.0001s4266 1.0kb downstream 1.0kb downstream 4188 true scaffold_1: 18790419-18794606 Capsella rubella
Carub.0001s4266 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 18793607-18794606 Capsella rubella
Carub.0001s4266 2.0kb upstream 2.0kb upstream 5188 true scaffold_1: 18788419-18793606 Capsella rubella
Carub.0001s4266 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 18788419-18790418 Capsella rubella
Carub.0001s4266 2.0kb downstream 2.0kb downstream 5188 true scaffold_1: 18790419-18795606 Capsella rubella
Carub.0001s4266 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 18793607-18795606 Capsella rubella
Carub.0001s4266 5.0kb upstream 5.0kb upstream 8188 true scaffold_1: 18785419-18793606 Capsella rubella
Carub.0001s4266 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 18785419-18790418 Capsella rubella
Carub.0001s4266 5.0kb downstream 5.0kb downstream 8188 true scaffold_1: 18790419-18798606 Capsella rubella
Carub.0001s4266 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 18793607-18798606 Capsella rubella
Carub.0001s4266 10.0kb upstream 10.0kb upstream 13188 true scaffold_1: 18780419-18793606 Capsella rubella
Carub.0001s4266 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 18780419-18790418 Capsella rubella
Carub.0001s4266 10.0kb downstream 10.0kb downstream 13188 true scaffold_1: 18790419-18803606 Capsella rubella
Carub.0001s4266 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 18793607-18803606 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361215 5261 Brassicaceae View MSA
123798119 5264 Brassicales-Malvales View MSA
124295795 5266 SBM View MSA
124253835 5268 Malvidae View MSA
124068168 5270 Rosid View MSA
123745809 5271 Pentapetalae View MSA
122795005 5272 Eudicot View MSA
122045304 5273 Angiosperm View MSA
121348130 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain