Gene : Carub.0001s4065 C. rubella v1.1
Defline:  (1 of 3) PTHR11014//PTHR11014:SF55 - PEPTIDASE M20 FAMILY MEMBER // IAA-AMINO ACID HYDROLASE ILR1-LIKE 1-RELATED Genomic Order:  4065
Name:  ? Carub.0001s4065 Secondary Identifier:  ? PAC:39230642
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s4065 0.5kb upstream 0.5kb upstream 3770 true scaffold_1: 17951311-17955080 Capsella rubella
Carub.0001s4065 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 17951311-17951810 Capsella rubella
Carub.0001s4065 0.5kb downstream 0.5kb downstream 3770 true scaffold_1: 17951811-17955580 Capsella rubella
Carub.0001s4065 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 17955081-17955580 Capsella rubella
Carub.0001s4065 1.0kb upstream 1.0kb upstream 4270 true scaffold_1: 17950811-17955080 Capsella rubella
Carub.0001s4065 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 17950811-17951810 Capsella rubella
Carub.0001s4065 1.0kb downstream 1.0kb downstream 4270 true scaffold_1: 17951811-17956080 Capsella rubella
Carub.0001s4065 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 17955081-17956080 Capsella rubella
Carub.0001s4065 2.0kb upstream 2.0kb upstream 5270 true scaffold_1: 17949811-17955080 Capsella rubella
Carub.0001s4065 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 17949811-17951810 Capsella rubella
Carub.0001s4065 2.0kb downstream 2.0kb downstream 5270 true scaffold_1: 17951811-17957080 Capsella rubella
Carub.0001s4065 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 17955081-17957080 Capsella rubella
Carub.0001s4065 5.0kb upstream 5.0kb upstream 8270 true scaffold_1: 17946811-17955080 Capsella rubella
Carub.0001s4065 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 17946811-17951810 Capsella rubella
Carub.0001s4065 5.0kb downstream 5.0kb downstream 8270 true scaffold_1: 17951811-17960080 Capsella rubella
Carub.0001s4065 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 17955081-17960080 Capsella rubella
Carub.0001s4065 10.0kb upstream 10.0kb upstream 13270 true scaffold_1: 17941811-17955080 Capsella rubella
Carub.0001s4065 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 17941811-17951810 Capsella rubella
Carub.0001s4065 10.0kb downstream 10.0kb downstream 13270 true scaffold_1: 17951811-17965080 Capsella rubella
Carub.0001s4065 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 17955081-17965080 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373614 5261 Brassicaceae View MSA
123830760 5264 Brassicales-Malvales View MSA
124337855 5266 SBM View MSA
124243641 5268 Malvidae View MSA
124073280 5270 Rosid View MSA
123745174 5271 Pentapetalae View MSA
122790280 5272 Eudicot View MSA
122042438 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain