Gene : Carub.0001s4328 C. rubella v1.1
Defline:  (1 of 1) PTHR11527//PTHR11527:SF106 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY // 17.4 KDA CLASS III HEAT SHOCK PROTEIN Genomic Order:  4328
Name:  ? Carub.0001s4328 Secondary Identifier:  ? PAC:39230961
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s4328 0.5kb upstream 0.5kb upstream 1485 true scaffold_1: 18992398-18993882 Capsella rubella
Carub.0001s4328 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 18993383-18993882 Capsella rubella
Carub.0001s4328 0.5kb downstream 0.5kb downstream 1485 true scaffold_1: 18991898-18993382 Capsella rubella
Carub.0001s4328 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 18991898-18992397 Capsella rubella
Carub.0001s4328 1.0kb upstream 1.0kb upstream 1985 true scaffold_1: 18992398-18994382 Capsella rubella
Carub.0001s4328 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 18993383-18994382 Capsella rubella
Carub.0001s4328 1.0kb downstream 1.0kb downstream 1985 true scaffold_1: 18991398-18993382 Capsella rubella
Carub.0001s4328 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 18991398-18992397 Capsella rubella
Carub.0001s4328 2.0kb upstream 2.0kb upstream 2985 true scaffold_1: 18992398-18995382 Capsella rubella
Carub.0001s4328 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 18993383-18995382 Capsella rubella
Carub.0001s4328 2.0kb downstream 2.0kb downstream 2985 true scaffold_1: 18990398-18993382 Capsella rubella
Carub.0001s4328 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 18990398-18992397 Capsella rubella
Carub.0001s4328 5.0kb upstream 5.0kb upstream 5985 true scaffold_1: 18992398-18998382 Capsella rubella
Carub.0001s4328 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 18993383-18998382 Capsella rubella
Carub.0001s4328 5.0kb downstream 5.0kb downstream 5985 true scaffold_1: 18987398-18993382 Capsella rubella
Carub.0001s4328 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 18987398-18992397 Capsella rubella
Carub.0001s4328 10.0kb upstream 10.0kb upstream 10985 true scaffold_1: 18992398-19003382 Capsella rubella
Carub.0001s4328 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 18993383-19003382 Capsella rubella
Carub.0001s4328 10.0kb downstream 10.0kb downstream 10985 true scaffold_1: 18982398-18993382 Capsella rubella
Carub.0001s4328 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 18982398-18992397 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026485 5273 Angiosperm View MSA
122373667 5261 Brassicaceae View MSA
123828452 5264 Brassicales-Malvales View MSA
124343503 5266 SBM View MSA
124240958 5268 Malvidae View MSA
124068191 5270 Rosid View MSA
123744962 5271 Pentapetalae View MSA
122787860 5272 Eudicot View MSA
121352128 5274 Embryophyte View MSA
123382557 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain