Gene : Carub.0001s4336 C. rubella v1.1
Defline:  (1 of 2) PTHR34788:SF1 - F15I1.22 Genomic Order:  4336
Name:  ? Carub.0001s4336 Secondary Identifier:  ? PAC:39228470
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s4336 0.5kb upstream 0.5kb upstream 875 true scaffold_1: 19018975-19019849 Capsella rubella
Carub.0001s4336 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 19018975-19019474 Capsella rubella
Carub.0001s4336 0.5kb downstream 0.5kb downstream 875 true scaffold_1: 19019475-19020349 Capsella rubella
Carub.0001s4336 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 19019850-19020349 Capsella rubella
Carub.0001s4336 1.0kb upstream 1.0kb upstream 1375 true scaffold_1: 19018475-19019849 Capsella rubella
Carub.0001s4336 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 19018475-19019474 Capsella rubella
Carub.0001s4336 1.0kb downstream 1.0kb downstream 1375 true scaffold_1: 19019475-19020849 Capsella rubella
Carub.0001s4336 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 19019850-19020849 Capsella rubella
Carub.0001s4336 2.0kb upstream 2.0kb upstream 2375 true scaffold_1: 19017475-19019849 Capsella rubella
Carub.0001s4336 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 19017475-19019474 Capsella rubella
Carub.0001s4336 2.0kb downstream 2.0kb downstream 2375 true scaffold_1: 19019475-19021849 Capsella rubella
Carub.0001s4336 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 19019850-19021849 Capsella rubella
Carub.0001s4336 5.0kb upstream 5.0kb upstream 5375 true scaffold_1: 19014475-19019849 Capsella rubella
Carub.0001s4336 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 19014475-19019474 Capsella rubella
Carub.0001s4336 5.0kb downstream 5.0kb downstream 5375 true scaffold_1: 19019475-19024849 Capsella rubella
Carub.0001s4336 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 19019850-19024849 Capsella rubella
Carub.0001s4336 10.0kb upstream 10.0kb upstream 10375 true scaffold_1: 19009475-19019849 Capsella rubella
Carub.0001s4336 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 19009475-19019474 Capsella rubella
Carub.0001s4336 10.0kb downstream 10.0kb downstream 10375 true scaffold_1: 19019475-19029849 Capsella rubella
Carub.0001s4336 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 19019850-19029849 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026756 5273 Angiosperm View MSA
122377619 5261 Brassicaceae View MSA
123837432 5264 Brassicales-Malvales View MSA
124348237 5266 SBM View MSA
124248033 5268 Malvidae View MSA
124060408 5270 Rosid View MSA
123748070 5271 Pentapetalae View MSA
122790898 5272 Eudicot View MSA
121296533 5274 Embryophyte View MSA
123334681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain