Gene : Carub.0001s4370 C. rubella v1.1
Defline:  (1 of 3) PTHR27001//PTHR27001:SF152 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMM17-RELATED Genomic Order:  4370
Name:  ? Carub.0001s4370 Secondary Identifier:  ? PAC:39227522
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s4370 0.5kb upstream 0.5kb upstream 3929 true scaffold_1: 19137094-19141022 Capsella rubella
Carub.0001s4370 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 19140523-19141022 Capsella rubella
Carub.0001s4370 0.5kb downstream 0.5kb downstream 3929 true scaffold_1: 19136594-19140522 Capsella rubella
Carub.0001s4370 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 19136594-19137093 Capsella rubella
Carub.0001s4370 1.0kb upstream 1.0kb upstream 4429 true scaffold_1: 19137094-19141522 Capsella rubella
Carub.0001s4370 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 19140523-19141522 Capsella rubella
Carub.0001s4370 1.0kb downstream 1.0kb downstream 4429 true scaffold_1: 19136094-19140522 Capsella rubella
Carub.0001s4370 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 19136094-19137093 Capsella rubella
Carub.0001s4370 2.0kb upstream 2.0kb upstream 5429 true scaffold_1: 19137094-19142522 Capsella rubella
Carub.0001s4370 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 19140523-19142522 Capsella rubella
Carub.0001s4370 2.0kb downstream 2.0kb downstream 5429 true scaffold_1: 19135094-19140522 Capsella rubella
Carub.0001s4370 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 19135094-19137093 Capsella rubella
Carub.0001s4370 5.0kb upstream 5.0kb upstream 8429 true scaffold_1: 19137094-19145522 Capsella rubella
Carub.0001s4370 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 19140523-19145522 Capsella rubella
Carub.0001s4370 5.0kb downstream 5.0kb downstream 8429 true scaffold_1: 19132094-19140522 Capsella rubella
Carub.0001s4370 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 19132094-19137093 Capsella rubella
Carub.0001s4370 10.0kb upstream 10.0kb upstream 13429 true scaffold_1: 19137094-19150522 Capsella rubella
Carub.0001s4370 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 19140523-19150522 Capsella rubella
Carub.0001s4370 10.0kb downstream 10.0kb downstream 13429 true scaffold_1: 19127094-19140522 Capsella rubella
Carub.0001s4370 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 19127094-19137093 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121502739 5273 Angiosperm View MSA
122343521 5261 Brassicaceae View MSA
123783698 5264 Brassicales-Malvales View MSA
124281916 5266 SBM View MSA
124136591 5268 Malvidae View MSA
123864429 5270 Rosid View MSA
123449741 5271 Pentapetalae View MSA
122485271 5272 Eudicot View MSA
121351058 5274 Embryophyte View MSA
123381993 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain