Gene : Carub.0001s3821 C. rubella v1.1

Defline:  (1 of 2) PTHR15907:SF49 - PROTEIN PLANT CADMIUM RESISTANCE 4-RELATED Genomic Order:  3821
Name:  ? Carub.0001s3821 Secondary Identifier:  ? PAC:39231136

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3821 0.5kb upstream 0.5kb upstream 1591 true scaffold_1: 16846420-16848010 Capsella rubella
Carub.0001s3821 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 16846420-16846919 Capsella rubella
Carub.0001s3821 0.5kb downstream 0.5kb downstream 1591 true scaffold_1: 16846920-16848510 Capsella rubella
Carub.0001s3821 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 16848011-16848510 Capsella rubella
Carub.0001s3821 1.0kb upstream 1.0kb upstream 2091 true scaffold_1: 16845920-16848010 Capsella rubella
Carub.0001s3821 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 16845920-16846919 Capsella rubella
Carub.0001s3821 1.0kb downstream 1.0kb downstream 2091 true scaffold_1: 16846920-16849010 Capsella rubella
Carub.0001s3821 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 16848011-16849010 Capsella rubella
Carub.0001s3821 2.0kb upstream 2.0kb upstream 3091 true scaffold_1: 16844920-16848010 Capsella rubella
Carub.0001s3821 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 16844920-16846919 Capsella rubella
Carub.0001s3821 2.0kb downstream 2.0kb downstream 3091 true scaffold_1: 16846920-16850010 Capsella rubella
Carub.0001s3821 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 16848011-16850010 Capsella rubella
Carub.0001s3821 5.0kb upstream 5.0kb upstream 6091 true scaffold_1: 16841920-16848010 Capsella rubella
Carub.0001s3821 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 16841920-16846919 Capsella rubella
Carub.0001s3821 5.0kb downstream 5.0kb downstream 6091 true scaffold_1: 16846920-16853010 Capsella rubella
Carub.0001s3821 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 16848011-16853010 Capsella rubella
Carub.0001s3821 10.0kb upstream 10.0kb upstream 11091 true scaffold_1: 16836920-16848010 Capsella rubella
Carub.0001s3821 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 16836920-16846919 Capsella rubella
Carub.0001s3821 10.0kb downstream 10.0kb downstream 11091 true scaffold_1: 16846920-16858010 Capsella rubella
Carub.0001s3821 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 16848011-16858010 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374502 5261 Brassicaceae View MSA
123841158 5264 Brassicales-Malvales View MSA
124349864 5266 SBM View MSA
124252298 5268 Malvidae View MSA
124074678 5270 Rosid View MSA
123752851 5271 Pentapetalae View MSA
122796063 5272 Eudicot View MSA
122051073 5273 Angiosperm View MSA
123429155 5275 Viridiplantae View MSA
121351660 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain