Gene : Carub.0001s3822 C. rubella v1.1
Defline:  (1 of 1) PTHR22844:SF202 - STOMATAL CYTOKINESIS DEFECTIVE Genomic Order:  3822
Name:  ? Carub.0001s3822 Secondary Identifier:  ? PAC:39229155
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7511 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3822 0.5kb upstream 0.5kb upstream 10991 true scaffold_1: 16848422-16859412 Capsella rubella
Carub.0001s3822 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 16858913-16859412 Capsella rubella
Carub.0001s3822 0.5kb downstream 0.5kb downstream 10991 true scaffold_1: 16847922-16858912 Capsella rubella
Carub.0001s3822 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 16847922-16848421 Capsella rubella
Carub.0001s3822 1.0kb upstream 1.0kb upstream 11491 true scaffold_1: 16848422-16859912 Capsella rubella
Carub.0001s3822 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 16858913-16859912 Capsella rubella
Carub.0001s3822 1.0kb downstream 1.0kb downstream 11491 true scaffold_1: 16847422-16858912 Capsella rubella
Carub.0001s3822 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 16847422-16848421 Capsella rubella
Carub.0001s3822 2.0kb upstream 2.0kb upstream 12491 true scaffold_1: 16848422-16860912 Capsella rubella
Carub.0001s3822 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 16858913-16860912 Capsella rubella
Carub.0001s3822 2.0kb downstream 2.0kb downstream 12491 true scaffold_1: 16846422-16858912 Capsella rubella
Carub.0001s3822 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 16846422-16848421 Capsella rubella
Carub.0001s3822 5.0kb upstream 5.0kb upstream 15491 true scaffold_1: 16848422-16863912 Capsella rubella
Carub.0001s3822 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 16858913-16863912 Capsella rubella
Carub.0001s3822 5.0kb downstream 5.0kb downstream 15491 true scaffold_1: 16843422-16858912 Capsella rubella
Carub.0001s3822 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 16843422-16848421 Capsella rubella
Carub.0001s3822 10.0kb upstream 10.0kb upstream 20491 true scaffold_1: 16848422-16868912 Capsella rubella
Carub.0001s3822 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 16858913-16868912 Capsella rubella
Carub.0001s3822 10.0kb downstream 10.0kb downstream 20491 true scaffold_1: 16838422-16858912 Capsella rubella
Carub.0001s3822 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 16838422-16848421 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366330 5261 Brassicaceae View MSA
123828000 5264 Brassicales-Malvales View MSA
124342011 5266 SBM View MSA
124241708 5268 Malvidae View MSA
124063489 5270 Rosid View MSA
123736587 5271 Pentapetalae View MSA
122787179 5272 Eudicot View MSA
122045572 5273 Angiosperm View MSA
121345381 5274 Embryophyte View MSA
123380209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain