Gene : Carub.0001s4009 C. rubella v1.1
Defline:  (1 of 1) PTHR32467:SF12 - AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 Genomic Order:  4009
Name:  ? Carub.0001s4009 Secondary Identifier:  ? PAC:39227861
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s4009 0.5kb upstream 0.5kb upstream 3849 true scaffold_1: 17731978-17735826 Capsella rubella
Carub.0001s4009 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 17731978-17732477 Capsella rubella
Carub.0001s4009 0.5kb downstream 0.5kb downstream 3849 true scaffold_1: 17732478-17736326 Capsella rubella
Carub.0001s4009 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 17735827-17736326 Capsella rubella
Carub.0001s4009 1.0kb upstream 1.0kb upstream 4349 true scaffold_1: 17731478-17735826 Capsella rubella
Carub.0001s4009 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 17731478-17732477 Capsella rubella
Carub.0001s4009 1.0kb downstream 1.0kb downstream 4349 true scaffold_1: 17732478-17736826 Capsella rubella
Carub.0001s4009 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 17735827-17736826 Capsella rubella
Carub.0001s4009 2.0kb upstream 2.0kb upstream 5349 true scaffold_1: 17730478-17735826 Capsella rubella
Carub.0001s4009 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 17730478-17732477 Capsella rubella
Carub.0001s4009 2.0kb downstream 2.0kb downstream 5349 true scaffold_1: 17732478-17737826 Capsella rubella
Carub.0001s4009 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 17735827-17737826 Capsella rubella
Carub.0001s4009 5.0kb upstream 5.0kb upstream 8349 true scaffold_1: 17727478-17735826 Capsella rubella
Carub.0001s4009 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 17727478-17732477 Capsella rubella
Carub.0001s4009 5.0kb downstream 5.0kb downstream 8349 true scaffold_1: 17732478-17740826 Capsella rubella
Carub.0001s4009 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 17735827-17740826 Capsella rubella
Carub.0001s4009 10.0kb upstream 10.0kb upstream 13349 true scaffold_1: 17722478-17735826 Capsella rubella
Carub.0001s4009 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 17722478-17732477 Capsella rubella
Carub.0001s4009 10.0kb downstream 10.0kb downstream 13349 true scaffold_1: 17732478-17745826 Capsella rubella
Carub.0001s4009 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 17735827-17745826 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041266 5273 Angiosperm View MSA
122372685 5261 Brassicaceae View MSA
123833494 5264 Brassicales-Malvales View MSA
124337344 5266 SBM View MSA
124247741 5268 Malvidae View MSA
124065940 5270 Rosid View MSA
123744753 5271 Pentapetalae View MSA
122796113 5272 Eudicot View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain