Gene : Carub.0005s2770 C. rubella v1.1

Defline:  (1 of 1) PTHR10774:SF51 - C2 CALCIUM/LIPID-BINDING ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE-RELATED Genomic Order:  2770
Name:  ? Carub.0005s2770 Secondary Identifier:  ? PAC:39225106

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2770 0.5kb upstream 0.5kb upstream 4390 true scaffold_5: 12814728-12819117 Capsella rubella
Carub.0005s2770 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 12814728-12815227 Capsella rubella
Carub.0005s2770 0.5kb downstream 0.5kb downstream 4390 true scaffold_5: 12815228-12819617 Capsella rubella
Carub.0005s2770 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 12819118-12819617 Capsella rubella
Carub.0005s2770 1.0kb upstream 1.0kb upstream 4890 true scaffold_5: 12814228-12819117 Capsella rubella
Carub.0005s2770 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 12814228-12815227 Capsella rubella
Carub.0005s2770 1.0kb downstream 1.0kb downstream 4890 true scaffold_5: 12815228-12820117 Capsella rubella
Carub.0005s2770 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 12819118-12820117 Capsella rubella
Carub.0005s2770 2.0kb upstream 2.0kb upstream 5890 true scaffold_5: 12813228-12819117 Capsella rubella
Carub.0005s2770 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 12813228-12815227 Capsella rubella
Carub.0005s2770 2.0kb downstream 2.0kb downstream 5890 true scaffold_5: 12815228-12821117 Capsella rubella
Carub.0005s2770 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 12819118-12821117 Capsella rubella
Carub.0005s2770 5.0kb upstream 5.0kb upstream 8890 true scaffold_5: 12810228-12819117 Capsella rubella
Carub.0005s2770 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 12810228-12815227 Capsella rubella
Carub.0005s2770 5.0kb downstream 5.0kb downstream 8890 true scaffold_5: 12815228-12824117 Capsella rubella
Carub.0005s2770 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 12819118-12824117 Capsella rubella
Carub.0005s2770 10.0kb upstream 10.0kb upstream 13890 true scaffold_5: 12805228-12819117 Capsella rubella
Carub.0005s2770 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 12805228-12815227 Capsella rubella
Carub.0005s2770 10.0kb downstream 10.0kb downstream 13890 true scaffold_5: 12815228-12829117 Capsella rubella
Carub.0005s2770 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 12819118-12829117 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372170 5261 Brassicaceae View MSA
123835935 5264 Brassicales-Malvales View MSA
124339114 5266 SBM View MSA
124239798 5268 Malvidae View MSA
124067167 5270 Rosid View MSA
123748686 5271 Pentapetalae View MSA
122791345 5272 Eudicot View MSA
122044587 5273 Angiosperm View MSA
123429031 5275 Viridiplantae View MSA
121346327 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain