Gene : Carub.0001s3745 C. rubella v1.1
Defline:  (1 of 2) 3.1.2.28 - 1,4-dihydroxy-2-naphthoyl-CoA hydrolase Genomic Order:  3745
Name:  ? Carub.0001s3745 Secondary Identifier:  ? PAC:39227726
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5837 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3745 0.5kb upstream 0.5kb upstream 1527 true scaffold_1: 16525986-16527512 Capsella rubella
Carub.0001s3745 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 16527013-16527512 Capsella rubella
Carub.0001s3745 0.5kb downstream 0.5kb downstream 1527 true scaffold_1: 16525486-16527012 Capsella rubella
Carub.0001s3745 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 16525486-16525985 Capsella rubella
Carub.0001s3745 1.0kb upstream 1.0kb upstream 2027 true scaffold_1: 16525986-16528012 Capsella rubella
Carub.0001s3745 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 16527013-16528012 Capsella rubella
Carub.0001s3745 1.0kb downstream 1.0kb downstream 2027 true scaffold_1: 16524986-16527012 Capsella rubella
Carub.0001s3745 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 16524986-16525985 Capsella rubella
Carub.0001s3745 2.0kb upstream 2.0kb upstream 3027 true scaffold_1: 16525986-16529012 Capsella rubella
Carub.0001s3745 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 16527013-16529012 Capsella rubella
Carub.0001s3745 2.0kb downstream 2.0kb downstream 3027 true scaffold_1: 16523986-16527012 Capsella rubella
Carub.0001s3745 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 16523986-16525985 Capsella rubella
Carub.0001s3745 5.0kb upstream 5.0kb upstream 6027 true scaffold_1: 16525986-16532012 Capsella rubella
Carub.0001s3745 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 16527013-16532012 Capsella rubella
Carub.0001s3745 5.0kb downstream 5.0kb downstream 6027 true scaffold_1: 16520986-16527012 Capsella rubella
Carub.0001s3745 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 16520986-16525985 Capsella rubella
Carub.0001s3745 10.0kb upstream 10.0kb upstream 11027 true scaffold_1: 16525986-16537012 Capsella rubella
Carub.0001s3745 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 16527013-16537012 Capsella rubella
Carub.0001s3745 10.0kb downstream 10.0kb downstream 11027 true scaffold_1: 16515986-16527012 Capsella rubella
Carub.0001s3745 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 16515986-16525985 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361560 5261 Brassicaceae View MSA
123835813 5264 Brassicales-Malvales View MSA
124338385 5266 SBM View MSA
124248114 5268 Malvidae View MSA
124067278 5270 Rosid View MSA
123738374 5271 Pentapetalae View MSA
122791322 5272 Eudicot View MSA
122042191 5273 Angiosperm View MSA
121348407 5274 Embryophyte View MSA
123380851 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain