Gene : Carub.0005s2506 C. rubella v1.1
Defline:  (1 of 47) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  2506
Name:  ? Carub.0005s2506 Secondary Identifier:  ? PAC:39224604
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2506 0.5kb upstream 0.5kb upstream 1947 true scaffold_5: 11852722-11854668 Capsella rubella
Carub.0005s2506 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 11854169-11854668 Capsella rubella
Carub.0005s2506 0.5kb downstream 0.5kb downstream 1947 true scaffold_5: 11852222-11854168 Capsella rubella
Carub.0005s2506 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 11852222-11852721 Capsella rubella
Carub.0005s2506 1.0kb upstream 1.0kb upstream 2447 true scaffold_5: 11852722-11855168 Capsella rubella
Carub.0005s2506 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 11854169-11855168 Capsella rubella
Carub.0005s2506 1.0kb downstream 1.0kb downstream 2447 true scaffold_5: 11851722-11854168 Capsella rubella
Carub.0005s2506 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 11851722-11852721 Capsella rubella
Carub.0005s2506 2.0kb upstream 2.0kb upstream 3447 true scaffold_5: 11852722-11856168 Capsella rubella
Carub.0005s2506 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 11854169-11856168 Capsella rubella
Carub.0005s2506 2.0kb downstream 2.0kb downstream 3447 true scaffold_5: 11850722-11854168 Capsella rubella
Carub.0005s2506 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 11850722-11852721 Capsella rubella
Carub.0005s2506 5.0kb upstream 5.0kb upstream 6447 true scaffold_5: 11852722-11859168 Capsella rubella
Carub.0005s2506 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 11854169-11859168 Capsella rubella
Carub.0005s2506 5.0kb downstream 5.0kb downstream 6447 true scaffold_5: 11847722-11854168 Capsella rubella
Carub.0005s2506 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 11847722-11852721 Capsella rubella
Carub.0005s2506 10.0kb upstream 10.0kb upstream 11447 true scaffold_5: 11852722-11864168 Capsella rubella
Carub.0005s2506 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 11854169-11864168 Capsella rubella
Carub.0005s2506 10.0kb downstream 10.0kb downstream 11447 true scaffold_5: 11842722-11854168 Capsella rubella
Carub.0005s2506 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 11842722-11852721 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665424 5273 Angiosperm View MSA
122379968 5261 Brassicaceae View MSA
123802499 5264 Brassicales-Malvales View MSA
124299689 5266 SBM View MSA
124151030 5268 Malvidae View MSA
124050250 5270 Rosid View MSA
123619785 5271 Pentapetalae View MSA
122654221 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
120937392 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain