Gene : Carub.0005s2936 C. rubella v1.1
Defline:  (1 of 3) KOG1493//KOG4172 - Anaphase-promoting complex (APC), subunit 11 // Predicted E3 ubiquitin ligase Genomic Order:  2936
Name:  ? Carub.0005s2936 Secondary Identifier:  ? PAC:39224643
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2936 0.5kb upstream 0.5kb upstream 1882 true scaffold_5: 13435443-13437324 Capsella rubella
Carub.0005s2936 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 13436825-13437324 Capsella rubella
Carub.0005s2936 0.5kb downstream 0.5kb downstream 1882 true scaffold_5: 13434943-13436824 Capsella rubella
Carub.0005s2936 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 13434943-13435442 Capsella rubella
Carub.0005s2936 1.0kb upstream 1.0kb upstream 2382 true scaffold_5: 13435443-13437824 Capsella rubella
Carub.0005s2936 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 13436825-13437824 Capsella rubella
Carub.0005s2936 1.0kb downstream 1.0kb downstream 2382 true scaffold_5: 13434443-13436824 Capsella rubella
Carub.0005s2936 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 13434443-13435442 Capsella rubella
Carub.0005s2936 2.0kb upstream 2.0kb upstream 3382 true scaffold_5: 13435443-13438824 Capsella rubella
Carub.0005s2936 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 13436825-13438824 Capsella rubella
Carub.0005s2936 2.0kb downstream 2.0kb downstream 3382 true scaffold_5: 13433443-13436824 Capsella rubella
Carub.0005s2936 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 13433443-13435442 Capsella rubella
Carub.0005s2936 5.0kb upstream 5.0kb upstream 6382 true scaffold_5: 13435443-13441824 Capsella rubella
Carub.0005s2936 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 13436825-13441824 Capsella rubella
Carub.0005s2936 5.0kb downstream 5.0kb downstream 6382 true scaffold_5: 13430443-13436824 Capsella rubella
Carub.0005s2936 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 13430443-13435442 Capsella rubella
Carub.0005s2936 10.0kb upstream 10.0kb upstream 11382 true scaffold_5: 13435443-13446824 Capsella rubella
Carub.0005s2936 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 13436825-13446824 Capsella rubella
Carub.0005s2936 10.0kb downstream 10.0kb downstream 11382 true scaffold_5: 13425443-13436824 Capsella rubella
Carub.0005s2936 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 13425443-13435442 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124349697 5266 SBM View MSA
122380182 5261 Brassicaceae View MSA
123839174 5264 Brassicales-Malvales View MSA
124253774 5268 Malvidae View MSA
124069328 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain