Gene : Carub.0001s2560 C. rubella v1.1
Defline:  (1 of 2) K09497 - T-complex protein 1 subunit epsilon (CCT5) Genomic Order:  2560
Name:  ? Carub.0001s2560 Secondary Identifier:  ? PAC:39230592
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2560 0.5kb upstream 0.5kb upstream 3750 true scaffold_1: 9228134-9231883 Capsella rubella
Carub.0001s2560 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 9228134-9228633 Capsella rubella
Carub.0001s2560 0.5kb downstream 0.5kb downstream 3750 true scaffold_1: 9228634-9232383 Capsella rubella
Carub.0001s2560 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 9231884-9232383 Capsella rubella
Carub.0001s2560 1.0kb upstream 1.0kb upstream 4250 true scaffold_1: 9227634-9231883 Capsella rubella
Carub.0001s2560 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 9227634-9228633 Capsella rubella
Carub.0001s2560 1.0kb downstream 1.0kb downstream 4250 true scaffold_1: 9228634-9232883 Capsella rubella
Carub.0001s2560 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 9231884-9232883 Capsella rubella
Carub.0001s2560 2.0kb upstream 2.0kb upstream 5250 true scaffold_1: 9226634-9231883 Capsella rubella
Carub.0001s2560 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 9226634-9228633 Capsella rubella
Carub.0001s2560 2.0kb downstream 2.0kb downstream 5250 true scaffold_1: 9228634-9233883 Capsella rubella
Carub.0001s2560 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 9231884-9233883 Capsella rubella
Carub.0001s2560 5.0kb upstream 5.0kb upstream 8250 true scaffold_1: 9223634-9231883 Capsella rubella
Carub.0001s2560 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 9223634-9228633 Capsella rubella
Carub.0001s2560 5.0kb downstream 5.0kb downstream 8250 true scaffold_1: 9228634-9236883 Capsella rubella
Carub.0001s2560 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 9231884-9236883 Capsella rubella
Carub.0001s2560 10.0kb upstream 10.0kb upstream 13250 true scaffold_1: 9218634-9231883 Capsella rubella
Carub.0001s2560 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 9218634-9228633 Capsella rubella
Carub.0001s2560 10.0kb downstream 10.0kb downstream 13250 true scaffold_1: 9228634-9241883 Capsella rubella
Carub.0001s2560 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 9231884-9241883 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380136 5261 Brassicaceae View MSA
123836485 5264 Brassicales-Malvales View MSA
124345281 5266 SBM View MSA
124242380 5268 Malvidae View MSA
124068195 5270 Rosid View MSA
123739090 5271 Pentapetalae View MSA
122792390 5272 Eudicot View MSA
122043511 5273 Angiosperm View MSA
121350582 5274 Embryophyte View MSA
123425092 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain