Gene : Carub.0001s2564 C. rubella v1.1
Defline:  (1 of 2) K10251 - 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase (HSD17B12, KAR, IFA38) Genomic Order:  2564
Name:  ? Carub.0001s2564 Secondary Identifier:  ? PAC:39229014
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5080 Capsella rubella pathologic  
Crubella PWY-6433 Capsella rubella pathologic  
Crubella PWY-6598 Capsella rubella pathologic  
Crubella PWY-7036 Capsella rubella pathologic  
Crubella PWY-7601 Capsella rubella pathologic  
Crubella PWY-7606 Capsella rubella pathologic  
Crubella PWY-7619 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2564 0.5kb upstream 0.5kb upstream 2817 true scaffold_1: 9245265-9248081 Capsella rubella
Carub.0001s2564 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 9247582-9248081 Capsella rubella
Carub.0001s2564 0.5kb downstream 0.5kb downstream 2817 true scaffold_1: 9244765-9247581 Capsella rubella
Carub.0001s2564 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 9244765-9245264 Capsella rubella
Carub.0001s2564 1.0kb upstream 1.0kb upstream 3317 true scaffold_1: 9245265-9248581 Capsella rubella
Carub.0001s2564 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 9247582-9248581 Capsella rubella
Carub.0001s2564 1.0kb downstream 1.0kb downstream 3317 true scaffold_1: 9244265-9247581 Capsella rubella
Carub.0001s2564 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 9244265-9245264 Capsella rubella
Carub.0001s2564 2.0kb upstream 2.0kb upstream 4317 true scaffold_1: 9245265-9249581 Capsella rubella
Carub.0001s2564 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 9247582-9249581 Capsella rubella
Carub.0001s2564 2.0kb downstream 2.0kb downstream 4317 true scaffold_1: 9243265-9247581 Capsella rubella
Carub.0001s2564 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 9243265-9245264 Capsella rubella
Carub.0001s2564 5.0kb upstream 5.0kb upstream 7317 true scaffold_1: 9245265-9252581 Capsella rubella
Carub.0001s2564 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 9247582-9252581 Capsella rubella
Carub.0001s2564 5.0kb downstream 5.0kb downstream 7317 true scaffold_1: 9240265-9247581 Capsella rubella
Carub.0001s2564 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 9240265-9245264 Capsella rubella
Carub.0001s2564 10.0kb upstream 10.0kb upstream 12317 true scaffold_1: 9245265-9257581 Capsella rubella
Carub.0001s2564 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 9247582-9257581 Capsella rubella
Carub.0001s2564 10.0kb downstream 10.0kb downstream 12317 true scaffold_1: 9235265-9247581 Capsella rubella
Carub.0001s2564 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 9235265-9245264 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363619 5261 Brassicaceae View MSA
123830884 5264 Brassicales-Malvales View MSA
124343782 5266 SBM View MSA
124240925 5268 Malvidae View MSA
124050409 5270 Rosid View MSA
123741518 5271 Pentapetalae View MSA
122787012 5272 Eudicot View MSA
122050087 5273 Angiosperm View MSA
123428985 5275 Viridiplantae View MSA
121351563 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain