Gene : Carub.0005s2929 C. rubella v1.1
Defline:  (1 of 8) PF07816 - Protein of unknown function (DUF1645) (DUF1645) Genomic Order:  2929
Name:  ? Carub.0005s2929 Secondary Identifier:  ? PAC:39225199
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2929 0.5kb upstream 0.5kb upstream 1670 true scaffold_5: 13400443-13402112 Capsella rubella
Carub.0005s2929 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 13401613-13402112 Capsella rubella
Carub.0005s2929 0.5kb downstream 0.5kb downstream 1670 true scaffold_5: 13399943-13401612 Capsella rubella
Carub.0005s2929 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 13399943-13400442 Capsella rubella
Carub.0005s2929 1.0kb upstream 1.0kb upstream 2170 true scaffold_5: 13400443-13402612 Capsella rubella
Carub.0005s2929 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 13401613-13402612 Capsella rubella
Carub.0005s2929 1.0kb downstream 1.0kb downstream 2170 true scaffold_5: 13399443-13401612 Capsella rubella
Carub.0005s2929 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 13399443-13400442 Capsella rubella
Carub.0005s2929 2.0kb upstream 2.0kb upstream 3170 true scaffold_5: 13400443-13403612 Capsella rubella
Carub.0005s2929 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 13401613-13403612 Capsella rubella
Carub.0005s2929 2.0kb downstream 2.0kb downstream 3170 true scaffold_5: 13398443-13401612 Capsella rubella
Carub.0005s2929 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 13398443-13400442 Capsella rubella
Carub.0005s2929 5.0kb upstream 5.0kb upstream 6170 true scaffold_5: 13400443-13406612 Capsella rubella
Carub.0005s2929 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 13401613-13406612 Capsella rubella
Carub.0005s2929 5.0kb downstream 5.0kb downstream 6170 true scaffold_5: 13395443-13401612 Capsella rubella
Carub.0005s2929 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 13395443-13400442 Capsella rubella
Carub.0005s2929 10.0kb upstream 10.0kb upstream 11170 true scaffold_5: 13400443-13411612 Capsella rubella
Carub.0005s2929 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 13401613-13411612 Capsella rubella
Carub.0005s2929 10.0kb downstream 10.0kb downstream 11170 true scaffold_5: 13390443-13401612 Capsella rubella
Carub.0005s2929 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 13390443-13400442 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378248 5261 Brassicaceae View MSA
123829546 5264 Brassicales-Malvales View MSA
124344695 5266 SBM View MSA
124253628 5268 Malvidae View MSA
124062410 5270 Rosid View MSA
123751104 5271 Pentapetalae View MSA
122786084 5272 Eudicot View MSA
122047451 5273 Angiosperm View MSA
121350053 5274 Embryophyte View MSA
123381556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain