Gene : Carub.0001s2588 C. rubella v1.1
Defline:  (1 of 2) PTHR15601//PTHR15601:SF4 - STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEIN SERP1/RAMP4 // SUBFAMILY NOT NAMED Genomic Order:  2588
Name:  ? Carub.0001s2588 Secondary Identifier:  ? PAC:39227504
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2588 0.5kb upstream 0.5kb upstream 1814 true scaffold_1: 9338178-9339991 Capsella rubella
Carub.0001s2588 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 9339492-9339991 Capsella rubella
Carub.0001s2588 0.5kb downstream 0.5kb downstream 1814 true scaffold_1: 9337678-9339491 Capsella rubella
Carub.0001s2588 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 9337678-9338177 Capsella rubella
Carub.0001s2588 1.0kb upstream 1.0kb upstream 2314 true scaffold_1: 9338178-9340491 Capsella rubella
Carub.0001s2588 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 9339492-9340491 Capsella rubella
Carub.0001s2588 1.0kb downstream 1.0kb downstream 2314 true scaffold_1: 9337178-9339491 Capsella rubella
Carub.0001s2588 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 9337178-9338177 Capsella rubella
Carub.0001s2588 2.0kb upstream 2.0kb upstream 3314 true scaffold_1: 9338178-9341491 Capsella rubella
Carub.0001s2588 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 9339492-9341491 Capsella rubella
Carub.0001s2588 2.0kb downstream 2.0kb downstream 3314 true scaffold_1: 9336178-9339491 Capsella rubella
Carub.0001s2588 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 9336178-9338177 Capsella rubella
Carub.0001s2588 5.0kb upstream 5.0kb upstream 6314 true scaffold_1: 9338178-9344491 Capsella rubella
Carub.0001s2588 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 9339492-9344491 Capsella rubella
Carub.0001s2588 5.0kb downstream 5.0kb downstream 6314 true scaffold_1: 9333178-9339491 Capsella rubella
Carub.0001s2588 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 9333178-9338177 Capsella rubella
Carub.0001s2588 10.0kb upstream 10.0kb upstream 11314 true scaffold_1: 9338178-9349491 Capsella rubella
Carub.0001s2588 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 9339492-9349491 Capsella rubella
Carub.0001s2588 10.0kb downstream 10.0kb downstream 11314 true scaffold_1: 9328178-9339491 Capsella rubella
Carub.0001s2588 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 9328178-9338177 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381593 5261 Brassicaceae View MSA
123829697 5264 Brassicales-Malvales View MSA
124340832 5266 SBM View MSA
124244099 5268 Malvidae View MSA
124071023 5270 Rosid View MSA
123745695 5271 Pentapetalae View MSA
122795442 5272 Eudicot View MSA
122050162 5273 Angiosperm View MSA
121345372 5274 Embryophyte View MSA
123428764 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain