Gene : Carub.0001s2612 C. rubella v1.1
Defline:  (1 of 1) PTHR10896//PTHR10896:SF20 - GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE // GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE I Genomic Order:  2612
Name:  ? Carub.0001s2612 Secondary Identifier:  ? PAC:39231527
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5800 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2612 0.5kb upstream 0.5kb upstream 3239 true scaffold_1: 9433026-9436264 Capsella rubella
Carub.0001s2612 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 9435765-9436264 Capsella rubella
Carub.0001s2612 0.5kb downstream 0.5kb downstream 3239 true scaffold_1: 9432526-9435764 Capsella rubella
Carub.0001s2612 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 9432526-9433025 Capsella rubella
Carub.0001s2612 1.0kb upstream 1.0kb upstream 3739 true scaffold_1: 9433026-9436764 Capsella rubella
Carub.0001s2612 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 9435765-9436764 Capsella rubella
Carub.0001s2612 1.0kb downstream 1.0kb downstream 3739 true scaffold_1: 9432026-9435764 Capsella rubella
Carub.0001s2612 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 9432026-9433025 Capsella rubella
Carub.0001s2612 2.0kb upstream 2.0kb upstream 4739 true scaffold_1: 9433026-9437764 Capsella rubella
Carub.0001s2612 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 9435765-9437764 Capsella rubella
Carub.0001s2612 2.0kb downstream 2.0kb downstream 4739 true scaffold_1: 9431026-9435764 Capsella rubella
Carub.0001s2612 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 9431026-9433025 Capsella rubella
Carub.0001s2612 5.0kb upstream 5.0kb upstream 7739 true scaffold_1: 9433026-9440764 Capsella rubella
Carub.0001s2612 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 9435765-9440764 Capsella rubella
Carub.0001s2612 5.0kb downstream 5.0kb downstream 7739 true scaffold_1: 9428026-9435764 Capsella rubella
Carub.0001s2612 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 9428026-9433025 Capsella rubella
Carub.0001s2612 10.0kb upstream 10.0kb upstream 12739 true scaffold_1: 9433026-9445764 Capsella rubella
Carub.0001s2612 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 9435765-9445764 Capsella rubella
Carub.0001s2612 10.0kb downstream 10.0kb downstream 12739 true scaffold_1: 9423026-9435764 Capsella rubella
Carub.0001s2612 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 9423026-9433025 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372036 5261 Brassicaceae View MSA
123829851 5264 Brassicales-Malvales View MSA
124351012 5266 SBM View MSA
124252838 5268 Malvidae View MSA
124065627 5270 Rosid View MSA
123748669 5271 Pentapetalae View MSA
122794067 5272 Eudicot View MSA
122050395 5273 Angiosperm View MSA
121346281 5274 Embryophyte View MSA
123380360 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain