Gene : Carub.0001s2628 C. rubella v1.1
Defline:  (1 of 1) PTHR12354 - INTERFERON-RELATED DEVELOPMENTAL REGULATOR Genomic Order:  2628
Name:  ? Carub.0001s2628 Secondary Identifier:  ? PAC:39228511
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2628 0.5kb upstream 0.5kb upstream 3451 true scaffold_1: 9500156-9503606 Capsella rubella
Carub.0001s2628 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 9500156-9500655 Capsella rubella
Carub.0001s2628 0.5kb downstream 0.5kb downstream 3451 true scaffold_1: 9500656-9504106 Capsella rubella
Carub.0001s2628 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 9503607-9504106 Capsella rubella
Carub.0001s2628 1.0kb upstream 1.0kb upstream 3951 true scaffold_1: 9499656-9503606 Capsella rubella
Carub.0001s2628 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 9499656-9500655 Capsella rubella
Carub.0001s2628 1.0kb downstream 1.0kb downstream 3951 true scaffold_1: 9500656-9504606 Capsella rubella
Carub.0001s2628 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 9503607-9504606 Capsella rubella
Carub.0001s2628 2.0kb upstream 2.0kb upstream 4951 true scaffold_1: 9498656-9503606 Capsella rubella
Carub.0001s2628 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 9498656-9500655 Capsella rubella
Carub.0001s2628 2.0kb downstream 2.0kb downstream 4951 true scaffold_1: 9500656-9505606 Capsella rubella
Carub.0001s2628 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 9503607-9505606 Capsella rubella
Carub.0001s2628 5.0kb upstream 5.0kb upstream 7951 true scaffold_1: 9495656-9503606 Capsella rubella
Carub.0001s2628 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 9495656-9500655 Capsella rubella
Carub.0001s2628 5.0kb downstream 5.0kb downstream 7951 true scaffold_1: 9500656-9508606 Capsella rubella
Carub.0001s2628 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 9503607-9508606 Capsella rubella
Carub.0001s2628 10.0kb upstream 10.0kb upstream 12951 true scaffold_1: 9490656-9503606 Capsella rubella
Carub.0001s2628 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 9490656-9500655 Capsella rubella
Carub.0001s2628 10.0kb downstream 10.0kb downstream 12951 true scaffold_1: 9500656-9513606 Capsella rubella
Carub.0001s2628 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 9503607-9513606 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368126 5261 Brassicaceae View MSA
123835663 5264 Brassicales-Malvales View MSA
124344407 5266 SBM View MSA
124242024 5268 Malvidae View MSA
124065398 5270 Rosid View MSA
123738030 5271 Pentapetalae View MSA
122785868 5272 Eudicot View MSA
122043831 5273 Angiosperm View MSA
121349485 5274 Embryophyte View MSA
123428444 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain