Gene : Carub.0001s2253 C. rubella v1.1
Defline:  (1 of 2) PTHR23315//PTHR23315:SF52 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Genomic Order:  2253
Name:  ? Carub.0001s2253 Secondary Identifier:  ? PAC:39230418
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7511 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2253 0.5kb upstream 0.5kb upstream 2919 true scaffold_1: 8137287-8140205 Capsella rubella
Carub.0001s2253 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8137287-8137786 Capsella rubella
Carub.0001s2253 0.5kb downstream 0.5kb downstream 2919 true scaffold_1: 8137787-8140705 Capsella rubella
Carub.0001s2253 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8140206-8140705 Capsella rubella
Carub.0001s2253 1.0kb upstream 1.0kb upstream 3419 true scaffold_1: 8136787-8140205 Capsella rubella
Carub.0001s2253 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8136787-8137786 Capsella rubella
Carub.0001s2253 1.0kb downstream 1.0kb downstream 3419 true scaffold_1: 8137787-8141205 Capsella rubella
Carub.0001s2253 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8140206-8141205 Capsella rubella
Carub.0001s2253 2.0kb upstream 2.0kb upstream 4419 true scaffold_1: 8135787-8140205 Capsella rubella
Carub.0001s2253 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8135787-8137786 Capsella rubella
Carub.0001s2253 2.0kb downstream 2.0kb downstream 4419 true scaffold_1: 8137787-8142205 Capsella rubella
Carub.0001s2253 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8140206-8142205 Capsella rubella
Carub.0001s2253 5.0kb upstream 5.0kb upstream 7419 true scaffold_1: 8132787-8140205 Capsella rubella
Carub.0001s2253 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8132787-8137786 Capsella rubella
Carub.0001s2253 5.0kb downstream 5.0kb downstream 7419 true scaffold_1: 8137787-8145205 Capsella rubella
Carub.0001s2253 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8140206-8145205 Capsella rubella
Carub.0001s2253 10.0kb upstream 10.0kb upstream 12419 true scaffold_1: 8127787-8140205 Capsella rubella
Carub.0001s2253 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8127787-8137786 Capsella rubella
Carub.0001s2253 10.0kb downstream 10.0kb downstream 12419 true scaffold_1: 8137787-8150205 Capsella rubella
Carub.0001s2253 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8140206-8150205 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366355 5261 Brassicaceae View MSA
123835937 5264 Brassicales-Malvales View MSA
124339411 5266 SBM View MSA
124237538 5268 Malvidae View MSA
124062819 5270 Rosid View MSA
123743592 5271 Pentapetalae View MSA
122789387 5272 Eudicot View MSA
122050659 5273 Angiosperm View MSA
121312051 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain